Variant report

Variant	rs4655359
Chromosome Location	chr1:213554371-213554372
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10779600	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10779602	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11586612	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187770	0.84[EUR][1000 genomes]
rs1187772	0.83[EUR][1000 genomes]
rs1187773	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187780	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1187781	1.00[ASN][1000 genomes]
rs1187782	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1202681	0.86[EUR][1000 genomes]
rs2033596	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3010232	0.91[EUR][1000 genomes]
rs3010233	0.94[EUR][1000 genomes]
rs4655260	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs753369	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213543200-213555000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:213543400-213554600	Weak transcription	Pancreas	Pancrea
3	chr1:213548600-213554600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:213550600-213556600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:213550800-213554800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr1:213551200-213554800	Weak transcription	Fetal Intestine Large	intestine
7	chr1:213552400-213555800	Weak transcription	HepG2	liver
8	chr1:213554000-213555000	Enhancers	Brain Germinal Matrix	brain
9	chr1:213554200-213554400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr1:213554200-213554400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr1:213554200-213554400	Enhancers	Left Ventricle	heart
12	chr1:213554200-213554800	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr1:213554200-213555000	Enhancers	Fetal Muscle Leg	muscle
14	chr1:213554200-213555400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr1:213554200-213556400	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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