Variant report

Variant	rs1078653
Chromosome Location	chr12:118213637-118213638
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11068675	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11832804	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12369419	1.00[CHB][hapmap]
rs17585881	0.86[AMR][1000 genomes]
rs35724007	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56138435	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56296939	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56918257	0.90[AMR][1000 genomes]
rs61937746	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61939862	0.85[AMR][1000 genomes]
rs61939864	0.85[AMR][1000 genomes]
rs6490153	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6490155	0.81[AMR][1000 genomes]
rs7309450	0.85[AMR][1000 genomes]
rs7960031	0.85[AMR][1000 genomes]
rs7966633	1.00[CHB][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118206800-118216400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr12:118210000-118230800	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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