Variant report

Variant	rs11068675
Chromosome Location	chr12:118206789-118206790
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1078653	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11832804	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12369419	1.00[CHB][hapmap]
rs17585881	0.86[AMR][1000 genomes]
rs35724007	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56138435	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56296939	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56918257	0.90[AMR][1000 genomes]
rs61937746	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61939862	0.85[AMR][1000 genomes]
rs61939864	0.85[AMR][1000 genomes]
rs6490153	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6490155	0.81[AMR][1000 genomes]
rs7309450	0.85[AMR][1000 genomes]
rs7960031	0.85[AMR][1000 genomes]
rs7966633	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899544	chr12:118191949-118206789	Weak transcription Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118197800-118207800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr12:118202800-118209600	Weak transcription	Pancreas	Pancrea
3	chr12:118205600-118206800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr12:118206000-118207600	Enhancers	HUVEC	blood vessel
5	chr12:118206200-118206800	Enhancers	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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