Variant report

Variant	rs10787605
Chromosome Location	chr10:117589922-117589923
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1007581	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1019150	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10490916	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10787599	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10787601	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10787606	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10885814	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10885817	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197449	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11197452	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11197454	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11197455	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11197463	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12412579	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12414992	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12774281	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12777802	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12778258	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12778588	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12784311	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12784459	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1547948	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2052066	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2420116	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2420119	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2420124	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2901062	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4307638	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4420180	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4529823	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4531378	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4751568	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4751569	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6585362	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs756497	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7895176	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7915580	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9332403	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs961155	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs979416	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs991389	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117586000-117590600	Weak transcription	Fetal Muscle Trunk	muscle
2	chr10:117587200-117590000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr10:117587600-117590200	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:117588400-117590800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:117588400-117591200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr10:117588600-117590800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr10:117588600-117590800	Enhancers	Muscle Satellite Cultured Cells	--
8	chr10:117588600-117591200	Enhancers	Osteobl	bone
9	chr10:117588800-117590800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr10:117588800-117590800	Enhancers	NHDF-Ad	bronchial
11	chr10:117589000-117590200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr10:117589000-117591000	Enhancers	Fetal Stomach	stomach
13	chr10:117589200-117590400	Enhancers	NHLF	lung
14	chr10:117589200-117590800	Enhancers	Adipose Nuclei	Adipose
15	chr10:117589400-117590000	Enhancers	Colon Smooth Muscle	Colon
16	chr10:117589400-117590200	Enhancers	NH-A	brain
17	chr10:117589400-117590600	Enhancers	HSMM	muscle
18	chr10:117589600-117590000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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