Variant report

Variant	rs10826351
Chromosome Location	chr10:19034388-19034389
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10508566	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10508567	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10764727	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs10829309	0.81[ASN][1000 genomes]
rs11006702	0.91[ASN][1000 genomes]
rs11007325	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11015955	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs11015970	0.91[ASN][1000 genomes]
rs11015971	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11015972	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs11015976	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11015978	0.87[ASN][1000 genomes]
rs11015979	1.00[CHB][hapmap];0.91[ASN][1000 genomes]
rs11591419	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs11819657	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12354939	0.88[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12355074	1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs12359830	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs12570499	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2130533	0.91[ASN][1000 genomes]
rs55931411	0.87[ASN][1000 genomes]
rs61033847	0.85[ASN][1000 genomes]
rs7074856	0.91[ASN][1000 genomes]
rs7076492	0.91[ASN][1000 genomes]
rs7077749	0.89[ASN][1000 genomes]
rs7093661	0.91[ASN][1000 genomes]
rs7095167	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7095319	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72777173	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes]
rs72777176	0.82[EUR][1000 genomes]
rs7895597	0.91[ASN][1000 genomes]
rs7897030	0.91[ASN][1000 genomes]
rs7901044	0.95[ASN][1000 genomes]
rs7908403	0.93[AMR][1000 genomes]
rs7912006	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9919358	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894915	chr10:18984571-19257664	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:19033400-19035000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links