Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10741012	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10764347	0.91[EUR][1000 genomes]
rs10764351	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10764353	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10764354	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10764361	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10764362	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10828350	0.82[EUR][1000 genomes]
rs10828359	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10828362	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10828364	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10828368	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11013168	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12241713	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12262044	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12355848	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1578343	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2105270	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2886153	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4748829	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7899968	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv894966	chr10:23090535-23202522	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23184400-23188400	Weak transcription	HMEC	breast
2	chr10:23184600-23188400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr10:23185800-23186200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:23185800-23186200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr10:23185800-23186400	Enhancers	Placenta	Placenta

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