Variant report

Variant	rs10861022
Chromosome Location	chr12:103870515-103870516
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:103868955..103871796-chr12:103872360..103875085,3	K562	blood:
2	chr12:103868882..103870646-chr12:103889851..103892092,2	MCF-7	breast:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10507166	0.82[CHB][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10735387	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10778253	0.82[CHB][hapmap]
rs10778257	0.86[CHB][hapmap];0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10861005	0.82[CHB][hapmap]
rs10861013	0.82[CHB][hapmap];0.82[EUR][1000 genomes]
rs10861015	0.82[CHB][hapmap];0.82[EUR][1000 genomes]
rs10861016	0.82[EUR][1000 genomes]
rs10861025	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11111556	0.82[CHB][hapmap]
rs1320345	0.82[CHB][hapmap];0.81[EUR][1000 genomes]
rs2374056	0.82[CHB][hapmap]
rs2374078	0.82[CHB][hapmap];0.85[AFR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2888733	0.82[EUR][1000 genomes]
rs4597156	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7136280	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7137784	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7298211	0.82[CHB][hapmap];0.81[EUR][1000 genomes]
rs7301460	0.82[CHB][hapmap]
rs7302890	0.82[CHB][hapmap]
rs7303147	0.82[CHB][hapmap]
rs7304308	0.82[CHB][hapmap]
rs7305169	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7305704	0.85[CHB][hapmap]
rs7952759	0.85[CHB][hapmap]
rs7961410	0.81[CHB][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103863800-103876200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr12:103864600-103887400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr12:103865600-103871800	Weak transcription	Primary T cells from cord blood	blood

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