The 2.0 version of rSNPBase

Variant report

Variant rs10874775
Chromosome Location chr1:93804783-93804784
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93753200-93806400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93765800-93809800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:93772600-93806000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:93789200-93810200 Weak transcription Esophagus oesophagus
5 chr1:93789600-93806600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:93790800-93810000 Weak transcription Fetal Intestine Small intestine
7 chr1:93794400-93810600 Weak transcription Fetal Brain Male brain
8 chr1:93794600-93806400 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:93795000-93806200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:93795000-93810600 Weak transcription Fetal Brain Female brain
11 chr1:93795200-93806000 Weak transcription HepG2 liver
12 chr1:93796800-93806200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:93797200-93810600 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:93797600-93805800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:93799000-93806200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:93799000-93810600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr1:93800400-93810200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:93800600-93806000 Weak transcription Colon Smooth Muscle Colon
19 chr1:93801400-93806600 Weak transcription Psoas Muscle Psoas
20 chr1:93801400-93810600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:93801600-93804800 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr1:93801600-93805000 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr1:93801800-93808600 Weak transcription Fetal Heart heart
24 chr1:93801800-93810600 Weak transcription Brain Germinal Matrix brain
25 chr1:93802200-93805200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr1:93802200-93806200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr1:93802200-93810600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr1:93802400-93806200 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr1:93802400-93810200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:93802600-93805200 Strong transcription Primary B cells from cord blood blood
31 chr1:93802600-93806000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:93802600-93811000 Weak transcription Spleen Spleen
33 chr1:93802800-93804800 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr1:93802800-93805000 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:93802800-93805200 Strong transcription Brain Inferior Temporal Lobe brain
36 chr1:93803000-93805000 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr1:93803000-93805000 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr1:93803000-93805000 Strong transcription GM12878-XiMat blood
39 chr1:93803000-93805200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:93803000-93805200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:93803000-93805200 Enhancers HMEC breast
42 chr1:93803200-93804800 Strong transcription Duodenum Smooth Muscle Duodenum
43 chr1:93803200-93805000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:93803200-93805000 Strong transcription Duodenum Mucosa Duodenum
45 chr1:93803200-93805000 Strong transcription Fetal Thymus thymus
46 chr1:93803200-93805200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:93803200-93805200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:93803400-93804800 Strong transcription Primary monocytes fromperipheralblood blood
49 chr1:93803400-93804800 Genic enhancers Aorta Aorta
50 chr1:93803400-93804800 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015