Variant report

Variant	rs10885818
Chromosome Location	chr10:117581883-117581884
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10787603	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10885816	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11197453	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11197460	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11593928	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12413701	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2420115	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2420121	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2420122	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2420126	0.84[EUR][1000 genomes]
rs2907531	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2907552	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2907553	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2907554	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2907555	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2907556	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2907558	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2907559	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2907561	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2907566	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2907569	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2907570	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2907576	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2907577	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2907578	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2907580	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2907582	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2907585	0.83[EUR][1000 genomes]
rs2960660	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2960661	0.93[EUR][1000 genomes]
rs2960662	0.93[EUR][1000 genomes]
rs2960664	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2960665	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2960666	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2960668	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2960670	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2960671	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2960672	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2960675	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2960678	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2960679	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2960680	0.87[EUR][1000 genomes]
rs2960681	0.87[EUR][1000 genomes]
rs2960729	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4447088	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6585366	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7088912	0.89[EUR][1000 genomes]
rs723471	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs725556	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs758579	0.87[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117578400-117585000	Weak transcription	Colon Smooth Muscle	Colon

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