Variant report

Variant	rs2960681
Chromosome Location	chr10:117542525-117542526
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10787603	0.91[EUR][1000 genomes]
rs10885809	0.82[EUR][1000 genomes]
rs10885811	0.89[EUR][1000 genomes]
rs10885812	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10885816	0.92[EUR][1000 genomes]
rs10885818	0.87[EUR][1000 genomes]
rs11197453	0.92[EUR][1000 genomes]
rs11593928	0.96[EUR][1000 genomes]
rs12411613	0.82[EUR][1000 genomes]
rs12413701	0.82[EUR][1000 genomes]
rs17093558	0.84[ASN][1000 genomes]
rs2420115	0.93[EUR][1000 genomes]
rs2420121	0.91[EUR][1000 genomes]
rs2420122	0.91[EUR][1000 genomes]
rs2907552	0.84[EUR][1000 genomes]
rs2907553	0.84[EUR][1000 genomes]
rs2907554	0.84[EUR][1000 genomes]
rs2907555	0.85[EUR][1000 genomes]
rs2907556	0.84[EUR][1000 genomes]
rs2907558	0.84[EUR][1000 genomes]
rs2907559	0.84[EUR][1000 genomes]
rs2907561	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2907566	0.81[EUR][1000 genomes]
rs2907569	0.91[EUR][1000 genomes]
rs2907570	0.91[EUR][1000 genomes]
rs2907576	0.92[EUR][1000 genomes]
rs2907577	0.92[EUR][1000 genomes]
rs2907578	0.92[EUR][1000 genomes]
rs2907580	0.92[EUR][1000 genomes]
rs2907582	0.93[EUR][1000 genomes]
rs2907584	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2960660	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2960661	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2960662	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2960664	0.91[EUR][1000 genomes]
rs2960665	0.91[EUR][1000 genomes]
rs2960666	0.92[EUR][1000 genomes]
rs2960668	0.91[EUR][1000 genomes]
rs2960670	0.91[EUR][1000 genomes]
rs2960671	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2960672	0.91[EUR][1000 genomes]
rs2960675	0.84[EUR][1000 genomes]
rs2960678	0.84[EUR][1000 genomes]
rs2960679	0.82[EUR][1000 genomes]
rs2960680	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2960687	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2960729	0.92[EUR][1000 genomes]
rs4447088	0.95[EUR][1000 genomes]
rs6585366	0.92[EUR][1000 genomes]
rs7088912	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs723471	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs725556	0.84[EUR][1000 genomes]
rs72826872	0.83[ASN][1000 genomes]
rs7478359	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs758579	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7915580	0.80[AFR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117540000-117548200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links