Variant report

Variant	rs12411613
Chromosome Location	chr10:117525514-117525515
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 71 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:71)

rs_ID	r²[population]
rs10787598	0.90[CEU][hapmap];0.82[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10787603	0.84[CEU][hapmap];0.82[ASN][1000 genomes]
rs10787607	0.84[CEU][hapmap]
rs10885798	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10885800	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10885802	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10885809	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10885811	0.95[CEU][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10885812	0.95[CEU][hapmap];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10885816	0.81[ASN][1000 genomes]
rs10885821	0.84[CEU][hapmap]
rs11197430	0.95[CEU][hapmap];0.82[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11197439	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11197453	0.81[ASN][1000 genomes]
rs11197460	0.81[CEU][hapmap]
rs11593928	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11595693	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12258630	0.80[CEU][hapmap]
rs12267719	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12360291	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17093558	0.83[CEU][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2420115	0.85[CEU][hapmap];0.83[ASN][1000 genomes]
rs2420121	0.81[CEU][hapmap];0.82[ASN][1000 genomes]
rs2420122	0.85[CEU][hapmap];0.82[ASN][1000 genomes]
rs2420125	0.84[CEU][hapmap]
rs2420126	0.84[CEU][hapmap]
rs2907531	0.84[CEU][hapmap]
rs2907551	0.81[CEU][hapmap]
rs2907552	0.81[CEU][hapmap]
rs2907553	0.81[ASN][1000 genomes]
rs2907554	0.84[CEU][hapmap];0.81[ASN][1000 genomes]
rs2907555	0.81[CEU][hapmap]
rs2907556	0.81[CEU][hapmap];0.81[ASN][1000 genomes]
rs2907558	0.81[ASN][1000 genomes]
rs2907559	0.84[CEU][hapmap];0.81[ASN][1000 genomes]
rs2907567	0.84[CEU][hapmap]
rs2907569	0.80[ASN][1000 genomes]
rs2907570	0.81[ASN][1000 genomes]
rs2907572	0.84[CEU][hapmap]
rs2907573	0.84[CEU][hapmap]
rs2907576	0.82[ASN][1000 genomes]
rs2907577	0.82[ASN][1000 genomes]
rs2907578	0.84[CEU][hapmap];0.82[ASN][1000 genomes]
rs2907580	0.85[CEU][hapmap];0.83[ASN][1000 genomes]
rs2907582	0.90[CEU][hapmap];0.83[ASN][1000 genomes]
rs2907584	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2907585	0.81[CEU][hapmap]
rs2960660	0.84[CEU][hapmap]
rs2960661	0.81[CEU][hapmap]
rs2960664	0.81[CEU][hapmap];0.82[ASN][1000 genomes]
rs2960665	0.82[ASN][1000 genomes]
rs2960668	0.81[ASN][1000 genomes]
rs2960670	0.81[ASN][1000 genomes]
rs2960675	0.81[ASN][1000 genomes]
rs2960676	0.81[CEU][hapmap]
rs2960678	0.81[CEU][hapmap]
rs2960679	0.84[CEU][hapmap]
rs2960680	0.95[CEU][hapmap];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2960681	0.82[EUR][1000 genomes]
rs2960687	0.95[CEU][hapmap];0.91[EUR][1000 genomes]
rs2960729	0.81[CEU][hapmap]
rs4430419	0.84[CEU][hapmap]
rs4447088	0.95[CEU][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6585366	0.81[CEU][hapmap]
rs7088912	0.82[ASN][1000 genomes]
rs723471	0.81[CEU][hapmap]
rs725556	0.84[CEU][hapmap]
rs72826872	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7478359	0.95[CEU][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs758579	0.95[CEU][hapmap];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs875377	0.84[CEU][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117522200-117525600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr10:117522200-117526400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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