Variant report

Variant	rs10939124
Chromosome Location	chr4:26593338-26593339
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10000211	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10939128	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11733702	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12501439	0.81[EUR][1000 genomes]
rs12505249	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12510371	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12640312	0.82[EUR][1000 genomes]
rs12640951	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12650361	0.86[EUR][1000 genomes]
rs13105574	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13111922	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13121299	0.93[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13121378	0.82[EUR][1000 genomes]
rs13136955	0.85[AFR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13138699	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13138712	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13146615	0.82[EUR][1000 genomes]
rs1565303	0.83[EUR][1000 genomes]
rs1565304	0.83[EUR][1000 genomes]
rs1619573	0.83[EUR][1000 genomes]
rs1861470	0.80[EUR][1000 genomes]
rs2111006	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2309413	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs260934	0.80[EUR][1000 genomes]
rs260935	0.80[EUR][1000 genomes]
rs260937	0.81[EUR][1000 genomes]
rs260946	0.83[EUR][1000 genomes]
rs260948	0.87[EUR][1000 genomes]
rs260950	0.87[EUR][1000 genomes]
rs260952	0.84[EUR][1000 genomes]
rs260956	0.83[EUR][1000 genomes]
rs260958	0.84[EUR][1000 genomes]
rs260959	0.83[EUR][1000 genomes]
rs260960	0.83[EUR][1000 genomes]
rs2908823	0.86[EUR][1000 genomes]
rs34832881	0.87[EUR][1000 genomes]
rs35232657	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35445672	0.93[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs62409934	0.83[EUR][1000 genomes]
rs6448458	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67655603	0.83[EUR][1000 genomes]
rs6821370	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7687087	0.82[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26586600-26601000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr4:26586800-26593400	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr4:26587000-26602000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr4:26587000-26603200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:26587200-26598000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr4:26591600-26609400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr4:26591800-26596400	Weak transcription	K562	blood
8	chr4:26591800-26607800	Weak transcription	Thymus	Thymus
9	chr4:26592800-26599000	Weak transcription	NH-A	brain
10	chr4:26593000-26598400	Weak transcription	Muscle Satellite Cultured Cells	--

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