Variant report

Variant	rs10957034
Chromosome Location	chr8:59078350-59078351
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10108890	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13260332	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13262713	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1876379	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2048102	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2048103	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2221576	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28621890	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35320500	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7013758	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7815202	0.80[EUR][1000 genomes]
rs7827907	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs979444	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2589647	chr8:59078095-59079512	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv512049	chr8:59078180-59078955	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv6064	chr8:59078198-59079062	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2299885	chr8:59078277-59078980	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59068400-59085000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59074800-59083200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr8:59075000-59082000	Weak transcription	Fetal Muscle Leg	muscle
4	chr8:59075400-59080800	Weak transcription	HepG2	liver
5	chr8:59075600-59079000	Weak transcription	GM12878-XiMat	blood
6	chr8:59075800-59079600	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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