Variant report

Variant	rs10108890
Chromosome Location	chr8:59086599-59086600
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:59080478..59082604-chr8:59084675..59086709,2	K562	blood:
2	chr8:59082438..59084332-chr8:59084919..59087190,2	MCF-7	breast:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10086720	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10100258	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10808688	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10808689	0.83[ASN][1000 genomes]
rs10957034	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11782856	0.83[ASN][1000 genomes]
rs13260332	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13261171	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13262713	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13275097	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1876379	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2048102	0.84[EUR][1000 genomes]
rs2048103	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2221576	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28621890	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2939974	0.89[ASN][1000 genomes]
rs2977384	0.89[ASN][1000 genomes]
rs2977386	0.89[ASN][1000 genomes]
rs2977390	0.89[ASN][1000 genomes]
rs2977391	0.89[ASN][1000 genomes]
rs34415132	0.85[ASN][1000 genomes]
rs35320500	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35764763	0.84[ASN][1000 genomes]
rs36094668	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4373508	0.91[ASN][1000 genomes]
rs4398899	0.91[ASN][1000 genomes]
rs7013758	0.82[EUR][1000 genomes]
rs7464538	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7815202	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7827907	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7833271	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs979444	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59083400-59087000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:59084200-59092000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:59084200-59099800	Weak transcription	Fetal Brain Female	brain
4	chr8:59085000-59086600	Enhancers	Placenta	Placenta
5	chr8:59085400-59086600	Enhancers	Primary B cells from cord blood	blood
6	chr8:59085600-59086600	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr8:59085800-59092800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr8:59086200-59086800	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr8:59086400-59086800	Enhancers	Fetal Muscle Leg	muscle

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