Variant report

Variant	rs7827907
Chromosome Location	chr8:59080374-59080375
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10108890	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10957034	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13260332	0.82[EUR][1000 genomes]
rs13262713	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1876379	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2048102	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2048103	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2221576	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28621890	0.81[EUR][1000 genomes]
rs35320500	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7013758	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs979444	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59068400-59085000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59074800-59083200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr8:59075000-59082000	Weak transcription	Fetal Muscle Leg	muscle
4	chr8:59075400-59080800	Weak transcription	HepG2	liver
5	chr8:59079600-59080400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr8:59080200-59082800	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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