Variant report

Variant	rs10982396
Chromosome Location	chr9:117518929-117518930
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10759736	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12352488	1.00[ASN][1000 genomes]
rs1322063	1.00[ASN][1000 genomes]
rs4978607	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6478105	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7469678	1.00[ASN][1000 genomes]
rs7869598	1.00[ASN][1000 genomes]
rs9299219	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs10982396	SNORA70C	cis	parietal	SCAN
rs10982396	SLC46A2	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:117517000-117519000	Weak transcription	Primary B cells from cord blood	blood
2	chr9:117517800-117519000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr9:117518000-117519000	Weak transcription	Primary B cells from peripheral blood	blood
4	chr9:117518000-117519000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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