Variant report

Variant	rs6478105
Chromosome Location	chr9:117517185-117517186
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10759736	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10982396	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12352488	1.00[ASN][1000 genomes]
rs1322063	1.00[ASN][1000 genomes]
rs4978607	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7469678	1.00[ASN][1000 genomes]
rs7869598	1.00[ASN][1000 genomes]
rs9299219	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:117515800-117517200	Enhancers	Primary T cells fromperipheralblood	blood
2	chr9:117515800-117517800	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr9:117515800-117518000	Enhancers	Primary B cells from peripheral blood	blood
4	chr9:117515800-117518000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr9:117516200-117517200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr9:117516200-117517400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr9:117516400-117517200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr9:117516400-117517200	Enhancers	Primary T helper naive cells from peripheral blood	blood
9	chr9:117516400-117517200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr9:117516400-117517200	Enhancers	Primary T killer memory cells from peripheral blood	blood
11	chr9:117516600-117517200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
12	chr9:117516600-117517200	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr9:117516600-117517200	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr9:117517000-117519000	Weak transcription	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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