Variant report

Variant	rs11014757
Chromosome Location	chr10:26091042-26091043
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10828876	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10828877	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10828878	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10828882	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10828884	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10828885	0.82[EUR][1000 genomes]
rs10828886	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014755	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11014759	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11014760	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11014763	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11014767	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11014768	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014770	0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11014772	0.81[ASN][1000 genomes]
rs11014773	0.81[ASN][1000 genomes]
rs11014778	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014779	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014780	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014781	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11014783	0.81[ASN][1000 genomes]
rs11014787	1.00[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11014798	1.00[AMR][1000 genomes]
rs12571781	1.00[AMR][1000 genomes]
rs17812563	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17812660	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2437388	0.86[ASN][1000 genomes]
rs2437389	0.85[ASN][1000 genomes]
rs2437390	0.86[ASN][1000 genomes]
rs2437397	0.84[ASN][1000 genomes]
rs2437399	0.84[ASN][1000 genomes]
rs2437400	0.84[ASN][1000 genomes]
rs2917190	0.81[ASN][1000 genomes]
rs3006268	0.81[ASN][1000 genomes]
rs3006269	0.81[ASN][1000 genomes]
rs74125991	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894974	chr10:26028530-26322783	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26088200-26106600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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