Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:34841363..34842193-chr11:45639005..45639830,2	MCF-7	breast:
2	chr11:45638222..45641169-chr11:45642480..45644652,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10734533	0.82[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs10838492	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11038578	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11038580	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12574417	0.94[ASN][1000 genomes]
rs12574431	0.81[ASN][1000 genomes]
rs12575810	0.81[ASN][1000 genomes]
rs12576823	0.94[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs12577157	0.95[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs12577749	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs1374750	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1562458	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1562459	0.95[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs35198848	0.95[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs4755330	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55989803	0.81[ASN][1000 genomes]
rs57159413	1.00[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs60865673	0.81[ASN][1000 genomes]
rs72896725	0.94[ASN][1000 genomes]
rs72901205	0.80[ASN][1000 genomes]
rs72904962	0.81[ASN][1000 genomes]
rs72904977	0.81[ASN][1000 genomes]
rs72904985	0.81[ASN][1000 genomes]
rs72910637	0.93[ASN][1000 genomes]
rs72910671	0.91[ASN][1000 genomes]
rs72910683	0.94[ASN][1000 genomes]
rs996880	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs11038579	ALX4	cis	parietal	SCAN
rs11038579	CHST1	cis	parietal	SCAN

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45628600-45641600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:45633800-45641800	Weak transcription	Gastric	stomach
3	chr11:45638800-45640600	Enhancers	Left Ventricle	heart
4	chr11:45639000-45639800	Enhancers	Fetal Muscle Leg	muscle
5	chr11:45639000-45640400	Enhancers	HUVEC	blood vessel
6	chr11:45639400-45639600	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
7	chr11:45639400-45639800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:45639400-45640200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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