Variant report

Variant	rs11068215
Chromosome Location	chr12:117301749-117301750
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:117211223..117211938-chr12:117300747..117301762,3	MCF-7	breast:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11068204	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068208	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068210	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068212	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068216	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11068217	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12227855	0.93[EUR][1000 genomes]
rs12578408	0.86[ASN][1000 genomes]
rs16947046	0.98[ASN][1000 genomes]
rs3748264	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3809194	0.93[EUR][1000 genomes]
rs73393789	0.93[EUR][1000 genomes]
rs7958222	1.00[EUR][1000 genomes]
rs7959242	0.93[EUR][1000 genomes]
rs9783443	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117294600-117302000	Weak transcription	Hela-S3	cervix
2	chr12:117294800-117302400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:117297800-117303000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr12:117298200-117302000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr12:117298400-117311800	Weak transcription	Right Atrium	heart
6	chr12:117299200-117302200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr12:117299400-117302200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr12:117299600-117302000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr12:117299800-117302000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr12:117299800-117302000	Weak transcription	A549	lung
11	chr12:117299800-117302200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr12:117300000-117302000	Weak transcription	Osteobl	bone
13	chr12:117300000-117302200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr12:117300000-117302200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr12:117300000-117303000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr12:117300000-117305400	Weak transcription	Primary B cells from cord blood	blood
17	chr12:117300000-117314200	Weak transcription	Thymus	Thymus
18	chr12:117300600-117303000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr12:117300800-117303000	Enhancers	NHDF-Ad	bronchial
20	chr12:117300800-117303000	Enhancers	NHLF	lung
21	chr12:117301000-117302200	Enhancers	NH-A	brain
22	chr12:117301000-117302400	Enhancers	Muscle Satellite Cultured Cells	--
23	chr12:117301000-117302600	Enhancers	HSMMtube	muscle
24	chr12:117301000-117302800	Enhancers	HepG2	liver
25	chr12:117301000-117303000	Enhancers	HSMM	muscle
26	chr12:117301600-117302000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr12:117301600-117302000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr12:117301600-117302800	Weak transcription	Fetal Thymus	thymus
29	chr12:117301600-117303200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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