Variant report

Variant	rs11068216
Chromosome Location	chr12:117302129-117302130
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10437849	1.00[MEX][hapmap]
rs1051879	1.00[MEX][hapmap]
rs11068204	1.00[CHB][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068208	1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068210	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068212	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11068215	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11068217	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11068265	1.00[TSI][hapmap]
rs11068275	0.85[CHB][hapmap]
rs12227855	0.93[EUR][1000 genomes]
rs12322695	1.00[MEX][hapmap]
rs12578408	0.86[ASN][1000 genomes]
rs16946996	0.83[GIH][hapmap]
rs16947003	0.83[GIH][hapmap]
rs16947046	1.00[CHB][hapmap];0.98[ASN][1000 genomes]
rs16947122	1.00[MEX][hapmap]
rs16947233	1.00[MEX][hapmap]
rs3748264	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3809194	1.00[CHB][hapmap];0.88[GIH][hapmap];0.93[EUR][1000 genomes]
rs3825101	1.00[TSI][hapmap]
rs7133142	1.00[MEX][hapmap]
rs7133609	1.00[MEX][hapmap]
rs7294581	1.00[MEX][hapmap]
rs7305313	1.00[MEX][hapmap]
rs73393789	0.93[EUR][1000 genomes]
rs7958222	1.00[EUR][1000 genomes]
rs7959242	0.93[EUR][1000 genomes]
rs7978853	1.00[MEX][hapmap]
rs9783443	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117294800-117302400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:117297800-117303000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr12:117298400-117311800	Weak transcription	Right Atrium	heart
4	chr12:117299200-117302200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr12:117299400-117302200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr12:117299800-117302200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr12:117300000-117302200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr12:117300000-117302200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr12:117300000-117303000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr12:117300000-117305400	Weak transcription	Primary B cells from cord blood	blood
11	chr12:117300000-117314200	Weak transcription	Thymus	Thymus
12	chr12:117300600-117303000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr12:117300800-117303000	Enhancers	NHDF-Ad	bronchial
14	chr12:117300800-117303000	Enhancers	NHLF	lung
15	chr12:117301000-117302200	Enhancers	NH-A	brain
16	chr12:117301000-117302400	Enhancers	Muscle Satellite Cultured Cells	--
17	chr12:117301000-117302600	Enhancers	HSMMtube	muscle
18	chr12:117301000-117302800	Enhancers	HepG2	liver
19	chr12:117301000-117303000	Enhancers	HSMM	muscle
20	chr12:117301600-117302800	Weak transcription	Fetal Thymus	thymus
21	chr12:117301600-117303200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr12:117302000-117302200	Enhancers	Hela-S3	cervix
23	chr12:117302000-117302400	Enhancers	Osteobl	bone
24	chr12:117302000-117302600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr12:117302000-117302600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr12:117302000-117302600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr12:117302000-117302600	Enhancers	A549	lung
28	chr12:117302000-117303000	Enhancers	Placenta	Placenta
29	chr12:117302000-117303200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr12:117302000-117303200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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