Variant report
| Variant | rs11080584 |
|---|---|
| Chromosome Location | chr18:12558095-12558096 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:12552400-12559600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 2 | chr18:12552400-12560000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 3 | chr18:12553200-12559600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr18:12553600-12567600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 5 | chr18:12553600-12574600 | Weak transcription | Right Ventricle | heart |
| 6 | chr18:12553800-12560000 | Weak transcription | Left Ventricle | heart |
| 7 | chr18:12553800-12569600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 8 | chr18:12554200-12567600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr18:12555200-12559400 | Weak transcription | Aorta | Aorta |
| 10 | chr18:12556800-12558600 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 11 | chr18:12557000-12559600 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 12 | chr18:12557000-12559800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 13 | chr18:12557000-12559800 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 14 | chr18:12557000-12560000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 15 | chr18:12557200-12558200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 16 | chr18:12557200-12558400 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr18:12557200-12558400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr18:12557200-12559200 | ZNF genes & repeats | Ganglion Eminence derived primary cultured neurospheres | brain |
| 19 | chr18:12557600-12559000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr18:12557600-12559600 | Weak transcription | Esophagus | oesophagus |
| 21 | chr18:12557600-12580800 | Weak transcription | Pancreas | Pancrea |
| 22 | chr18:12557800-12558400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 23 | chr18:12557800-12558400 | ZNF genes & repeats | Fetal Brain Female | brain |
| 24 | chr18:12557800-12558400 | ZNF genes & repeats | Fetal Lung | lung |
| 25 | chr18:12558000-12558400 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 26 | chr18:12558000-12558400 | ZNF genes & repeats | Stomach Smooth Muscle | stomach |
| 27 | chr18:12558000-12558800 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr18:12558000-12559200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 29 | chr18:12558000-12559600 | ZNF genes & repeats | Fetal Stomach | stomach |
