Variant report

Variant rs12709540
Chromosome Location chr18:12551183-12551184
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12478800-12551800 Weak transcription Pancreas Pancrea
2 chr18:12493200-12551800 Weak transcription Stomach Smooth Muscle stomach
3 chr18:12511400-12551800 Weak transcription Lung lung
4 chr18:12516000-12553200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr18:12516600-12555000 Weak transcription Aorta Aorta
6 chr18:12518600-12551800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr18:12520800-12551800 Weak transcription Colon Smooth Muscle Colon
8 chr18:12520800-12552000 Weak transcription NHLF lung
9 chr18:12521000-12552200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr18:12530600-12551600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr18:12533200-12551800 Weak transcription HSMMtube muscle
12 chr18:12534000-12551800 Weak transcription Fetal Brain Male brain
13 chr18:12534600-12551600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr18:12541000-12551800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr18:12541000-12552000 Weak transcription Gastric stomach
16 chr18:12541400-12553000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr18:12542600-12551800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr18:12542600-12551800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr18:12543400-12551600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr18:12543600-12551800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr18:12543800-12551800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr18:12543800-12551800 Weak transcription NH-A brain
23 chr18:12543800-12552000 Weak transcription Fetal Muscle Leg muscle
24 chr18:12544000-12551800 Weak transcription HSMM muscle
25 chr18:12544200-12551600 Weak transcription HMEC breast
26 chr18:12544800-12551800 Weak transcription Liver Liver
27 chr18:12545200-12553600 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr18:12545600-12553000 Weak transcription Psoas Muscle Psoas
29 chr18:12546800-12551800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr18:12546800-12551800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr18:12546800-12557000 Weak transcription Ovary ovary
32 chr18:12547000-12551800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr18:12548000-12551800 Weak transcription Fetal Brain Female brain
34 chr18:12549200-12551600 Weak transcription Brain Cingulate Gyrus brain
35 chr18:12549200-12551800 Weak transcription Brain Germinal Matrix brain
36 chr18:12549200-12551800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr18:12549200-12551800 Weak transcription Right Atrium heart
38 chr18:12550200-12551600 Weak transcription Osteobl bone
39 chr18:12550200-12551800 Weak transcription Right Ventricle heart
40 chr18:12550200-12552600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr18:12550600-12551800 Weak transcription Left Ventricle heart

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