The 2.0 version of rSNPBase

Variant report

Variant rs58215411
Chromosome Location chr18:12554125-12554126
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12516600-12555000 Weak transcription Aorta Aorta
2 chr18:12546800-12557000 Weak transcription Ovary ovary
3 chr18:12552200-12554200 Enhancers Skeletal Muscle Female skeletal muscle
4 chr18:12552400-12554800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr18:12552400-12555800 Weak transcription HSMMtube muscle
6 chr18:12552400-12556600 Weak transcription NHDF-Ad bronchial
7 chr18:12552400-12557000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr18:12552400-12557200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr18:12552400-12557800 Weak transcription Muscle Satellite Cultured Cells --
10 chr18:12552400-12559600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr18:12552400-12560000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr18:12552600-12556600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr18:12552600-12557000 Weak transcription Pancreas Pancrea
14 chr18:12552600-12558000 Weak transcription Stomach Smooth Muscle stomach
15 chr18:12553000-12557000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr18:12553200-12559600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr18:12553400-12557000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr18:12553600-12555000 Weak transcription Psoas Muscle Psoas
19 chr18:12553600-12556800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr18:12553600-12557000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr18:12553600-12557200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr18:12553600-12557200 Weak transcription Esophagus oesophagus
23 chr18:12553600-12567600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr18:12553600-12574600 Weak transcription Right Ventricle heart
25 chr18:12553800-12560000 Weak transcription Left Ventricle heart
26 chr18:12553800-12569600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015