Variant report

Variant rs1940975
Chromosome Location chr18:12605682-12605683
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:12597000-12605800 Weak transcription Gastric stomach
2 chr18:12597000-12605800 Weak transcription K562 blood
3 chr18:12597000-12606800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr18:12597800-12610800 Weak transcription Right Ventricle heart
5 chr18:12597800-12634600 Weak transcription Aorta Aorta
6 chr18:12598000-12606600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr18:12598000-12607000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr18:12598000-12607200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr18:12598000-12610000 Weak transcription Lung lung
10 chr18:12598200-12606800 Weak transcription Brain Anterior Caudate brain
11 chr18:12598600-12608600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr18:12598800-12606000 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr18:12598800-12606000 Weak transcription Left Ventricle heart
14 chr18:12598800-12606800 Weak transcription Brain Cingulate Gyrus brain
15 chr18:12598800-12607000 Weak transcription Brain Angular Gyrus brain
16 chr18:12598800-12609000 Weak transcription Right Atrium heart
17 chr18:12599000-12606800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr18:12599000-12606800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr18:12599800-12606200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr18:12599800-12607000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr18:12600000-12606200 Weak transcription A549 lung
22 chr18:12600000-12607400 Weak transcription Pancreas Pancrea
23 chr18:12600200-12607000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr18:12600400-12605800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr18:12600400-12605800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr18:12600400-12605800 Weak transcription Hela-S3 cervix
27 chr18:12600400-12606600 Weak transcription HepG2 liver
28 chr18:12600400-12606800 Weak transcription HSMM muscle
29 chr18:12600400-12607000 Weak transcription NHLF lung
30 chr18:12600400-12608600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr18:12600600-12606000 Weak transcription NHEK skin
32 chr18:12600600-12606400 Weak transcription HSMMtube muscle
33 chr18:12600600-12606800 Weak transcription NHDF-Ad bronchial
34 chr18:12602200-12609200 Weak transcription Fetal Brain Male brain
35 chr18:12602200-12638400 Weak transcription Fetal Brain Female brain
36 chr18:12602600-12605800 Weak transcription Primary hematopoietic stem cells blood
37 chr18:12602600-12606800 Weak transcription Adipose Nuclei Adipose
38 chr18:12602800-12605800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr18:12602800-12605800 Weak transcription HUVEC blood vessel
40 chr18:12602800-12611200 Weak transcription Spleen Spleen
41 chr18:12603000-12605800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr18:12603000-12607000 Weak transcription Fetal Heart heart
43 chr18:12603200-12605800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr18:12603200-12606800 Weak transcription Brain Hippocampus Middle brain
45 chr18:12604600-12605800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr18:12604600-12607000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr18:12604800-12610800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr18:12605000-12605800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr18:12605000-12606800 Enhancers Muscle Satellite Cultured Cells --
50 chr18:12605200-12606800 Weak transcription Duodenum Smooth Muscle Duodenum

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