Variant report

Variant rs11085620
Chromosome Location chr19:23929144-23929145
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23922200-23933600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23924000-23929800 Weak transcription Rectal Smooth Muscle rectum
4 chr19:23924200-23930000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
5 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:23924600-23933600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
7 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
8 chr19:23925400-23929200 Weak transcription Colon Smooth Muscle Colon
9 chr19:23925400-23933000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
10 chr19:23925600-23930000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
11 chr19:23925800-23930200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr19:23925800-23930400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
13 chr19:23926000-23930000 ZNF genes & repeats Liver Liver
14 chr19:23926000-23930000 ZNF genes & repeats Fetal Lung lung
15 chr19:23926000-23933600 ZNF genes & repeats Dnd41 blood
16 chr19:23926200-23929800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:23926200-23929800 ZNF genes & repeats Fetal Brain Female brain
18 chr19:23926200-23932600 ZNF genes & repeats Primary B cells from peripheral blood blood
19 chr19:23926400-23930000 ZNF genes & repeats Primary hematopoietic stem cells blood
20 chr19:23926400-23930000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr19:23926400-23930000 ZNF genes & repeats Adipose Nuclei Adipose
22 chr19:23926600-23930000 ZNF genes & repeats H1 Cell Line embryonic stem cell
23 chr19:23926600-23930000 ZNF genes & repeats Primary B cells from cord blood blood
24 chr19:23926600-23930000 ZNF genes & repeats Primary T cells from cord blood blood
25 chr19:23926600-23930000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
26 chr19:23926600-23930200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:23926800-23929400 Weak transcription Aorta Aorta
28 chr19:23926800-23929800 ZNF genes & repeats Brain Germinal Matrix brain
29 chr19:23926800-23930000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
30 chr19:23926800-23930200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:23927000-23929800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr19:23927000-23930000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
33 chr19:23927000-23930000 ZNF genes & repeats Primary T cells fromperipheralblood blood
34 chr19:23927000-23930000 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
35 chr19:23927000-23930000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:23927000-23930000 ZNF genes & repeats Fetal Muscle Trunk muscle
37 chr19:23927000-23930000 Strong transcription Placenta Amnion Placenta Amnion
38 chr19:23927000-23930000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
39 chr19:23927000-23930200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
40 chr19:23927200-23929400 Strong transcription Primary T helper naive cells from peripheral blood blood
41 chr19:23927200-23930000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
42 chr19:23927200-23931400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr19:23927200-23940800 Weak transcription Brain Angular Gyrus brain
44 chr19:23927400-23930000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
45 chr19:23927400-23930000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
46 chr19:23927600-23929200 Weak transcription Brain Cingulate Gyrus brain
47 chr19:23927600-23929200 Weak transcription Brain Hippocampus Middle brain
48 chr19:23927600-23929200 Weak transcription Ovary ovary
49 chr19:23927600-23929400 Weak transcription Right Ventricle heart
50 chr19:23927600-23929400 Weak transcription Stomach Smooth Muscle stomach

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