The 2.0 version of rSNPBase

Variant report

Variant rs6511524
Chromosome Location chr19:23938625-23938626
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
4 chr19:23927200-23940800 Weak transcription Brain Angular Gyrus brain
5 chr19:23927600-23940800 Weak transcription Brain Anterior Caudate brain
6 chr19:23927800-23940800 Weak transcription Fetal Heart heart
7 chr19:23928200-23940400 Weak transcription Osteobl bone
8 chr19:23929600-23940800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr19:23929600-23940800 Weak transcription Stomach Smooth Muscle stomach
10 chr19:23929600-23941000 Weak transcription Colon Smooth Muscle Colon
11 chr19:23929600-23941000 Weak transcription Right Ventricle heart
12 chr19:23929800-23940400 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr19:23929800-23940600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr19:23929800-23940600 Weak transcription Fetal Kidney kidney
15 chr19:23929800-23940800 Weak transcription Brain Cingulate Gyrus brain
16 chr19:23930000-23940600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr19:23930000-23940600 Weak transcription Placenta Amnion Placenta Amnion
18 chr19:23930000-23940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr19:23930000-23941000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr19:23930000-23941000 Weak transcription Gastric stomach
21 chr19:23930000-23941000 Weak transcription Left Ventricle heart
22 chr19:23930200-23939200 Weak transcription K562 blood
23 chr19:23930400-23940800 Weak transcription Fetal Thymus thymus
24 chr19:23931400-23940400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr19:23931600-23940800 Weak transcription Placenta Placenta
26 chr19:23931600-23941000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr19:23932200-23940800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr19:23932400-23940800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr19:23932600-23940400 Weak transcription Primary B cells from peripheral blood blood
30 chr19:23932600-23940400 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr19:23932600-23940400 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr19:23932600-23940400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr19:23933200-23940600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr19:23933400-23940800 Weak transcription NH-A brain
35 chr19:23934200-23941000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr19:23934400-23940400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr19:23935200-23939400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:23935200-23939800 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr19:23935400-23939200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr19:23935400-23939400 Weak transcription Esophagus oesophagus
41 chr19:23935400-23940400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:23935400-23940600 Weak transcription Adipose Nuclei Adipose
43 chr19:23935400-23940800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr19:23935400-23941000 Weak transcription Aorta Aorta
45 chr19:23935400-23941000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr19:23935400-23941000 Weak transcription Spleen Spleen
47 chr19:23935600-23939200 Weak transcription Fetal Muscle Trunk muscle
48 chr19:23935600-23940400 Weak transcription Primary T cells fromperipheralblood blood
49 chr19:23935800-23940400 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr19:23935800-23940400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015