Variant report

Variant rs7409036
Chromosome Location chr19:23942136-23942137
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23940400-23942200 Active TSS Brain Germinal Matrix brain
2 chr19:23940400-23942200 Active TSS Fetal Lung lung
3 chr19:23940600-23942200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23940600-23942200 Active TSS Fetal Brain Female brain
5 chr19:23940800-23942200 Active TSS H9 Cell Line embryonic stem cell
6 chr19:23940800-23942200 Flanking Active TSS Primary T cells fromperipheralblood blood
7 chr19:23940800-23942200 Active TSS Primary hematopoietic stem cells short term culture blood
8 chr19:23940800-23942200 Active TSS Duodenum Mucosa Duodenum
9 chr19:23940800-23942200 Active TSS NHDF-Ad bronchial
10 chr19:23940800-23942200 Active TSS NHEK skin
11 chr19:23941000-23942200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr19:23941000-23942200 Active TSS Brain Anterior Caudate brain
13 chr19:23941200-23942200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
14 chr19:23941800-23942200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr19:23941800-23942200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr19:23941800-23942200 Flanking Active TSS Primary B cells from cord blood blood
17 chr19:23941800-23942200 Flanking Active TSS Primary B cells from peripheral blood blood
18 chr19:23941800-23942200 Flanking Active TSS Primary T cells from cord blood blood
19 chr19:23941800-23942200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr19:23941800-23942200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr19:23941800-23942200 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr19:23941800-23942200 Enhancers Gastric stomach
23 chr19:23941800-23942200 Enhancers Lung lung
24 chr19:23941800-23942200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
25 chr19:23941800-23942200 Flanking Active TSS Dnd41 blood
26 chr19:23941800-23943200 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr19:23941800-23945000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:23941800-23945000 Weak transcription Aorta Aorta
29 chr19:23941800-23945000 Weak transcription Esophagus oesophagus
30 chr19:23941800-23945000 Weak transcription Placenta Placenta
31 chr19:23941800-23945000 Weak transcription Pancreas Pancrea
32 chr19:23941800-23945200 Weak transcription Primary hematopoietic stem cells blood
33 chr19:23941800-23945200 Weak transcription Spleen Spleen
34 chr19:23941800-23945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr19:23941800-23945600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr19:23941800-23945600 Weak transcription Placenta Amnion Placenta Amnion
37 chr19:23942000-23942200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr19:23942000-23942200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr19:23942000-23942200 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr19:23942000-23942200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
41 chr19:23942000-23942200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
42 chr19:23942000-23942200 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr19:23942000-23942200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr19:23942000-23942200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:23942000-23942200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr19:23942000-23942200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr19:23942000-23942200 Flanking Active TSS Brain Angular Gyrus brain
48 chr19:23942000-23942200 Enhancers Brain Hippocampus Middle brain
49 chr19:23942000-23942200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
50 chr19:23942000-23942200 Enhancers Fetal Brain Male brain

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