The 2.0 version of rSNPBase

Variant report

Variant rs10404600
Chromosome Location chr19:23994435-23994436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23965600-24000400 Weak transcription Pancreas Pancrea
2 chr19:23972800-23998800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr19:23973800-24000400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr19:23973800-24001200 Weak transcription H9 Cell Line embryonic stem cell
5 chr19:23977000-23998000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr19:23980000-24000600 Weak transcription K562 blood
7 chr19:23980200-23994800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:23982000-23997000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr19:23982200-24004400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:23984200-24001800 Weak transcription Ovary ovary
11 chr19:23986400-23995200 Weak transcription Primary T cells from cord blood blood
12 chr19:23987600-24000200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr19:23988000-23995800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr19:23988200-23999600 Weak transcription Fetal Kidney kidney
15 chr19:23990000-24000800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr19:23991800-24000200 Weak transcription Primary hematopoietic stem cells blood
17 chr19:23992200-23994800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr19:23992400-23997000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr19:23993600-23999000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr19:23993600-24002000 Weak transcription Aorta Aorta
21 chr19:23993800-23994600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr19:23993800-23997600 Weak transcription H1 Cell Line embryonic stem cell
23 chr19:23994000-23994600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr19:23994200-23995400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:23994200-23995800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr19:23994200-23997000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr19:23994200-23997200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr19:23994200-23997600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr19:23994200-24004000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr19:23994400-23995600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:23994400-23995800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr19:23994400-23996000 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015