The 2.0 version of rSNPBase

Variant report

Variant rs6511516
Chromosome Location chr19:23932861-23932862
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23922200-23933600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:23924600-23933600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
5 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
6 chr19:23925400-23933000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
7 chr19:23926000-23933600 ZNF genes & repeats Dnd41 blood
8 chr19:23927200-23940800 Weak transcription Brain Angular Gyrus brain
9 chr19:23927600-23940800 Weak transcription Brain Anterior Caudate brain
10 chr19:23927800-23940800 Weak transcription Fetal Heart heart
11 chr19:23928200-23940400 Weak transcription Osteobl bone
12 chr19:23928600-23933600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr19:23928800-23934000 Weak transcription HSMMtube muscle
14 chr19:23929600-23940800 Weak transcription Brain Inferior Temporal Lobe brain
15 chr19:23929600-23940800 Weak transcription Stomach Smooth Muscle stomach
16 chr19:23929600-23941000 Weak transcription Colon Smooth Muscle Colon
17 chr19:23929600-23941000 Weak transcription Right Ventricle heart
18 chr19:23929800-23934200 Weak transcription Spleen Spleen
19 chr19:23929800-23937400 Weak transcription Fetal Brain Male brain
20 chr19:23929800-23940400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr19:23929800-23940600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr19:23929800-23940600 Weak transcription Fetal Kidney kidney
23 chr19:23929800-23940800 Weak transcription Brain Cingulate Gyrus brain
24 chr19:23930000-23933400 Weak transcription Fetal Muscle Leg muscle
25 chr19:23930000-23935000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr19:23930000-23940600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr19:23930000-23940600 Weak transcription Placenta Amnion Placenta Amnion
28 chr19:23930000-23940800 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr19:23930000-23941000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr19:23930000-23941000 Weak transcription Gastric stomach
31 chr19:23930000-23941000 Weak transcription Left Ventricle heart
32 chr19:23930200-23939200 Weak transcription K562 blood
33 chr19:23930400-23940800 Weak transcription Fetal Thymus thymus
34 chr19:23930800-23933600 ZNF genes & repeats Primary T cells from cord blood blood
35 chr19:23930800-23937800 ZNF genes & repeats Primary hematopoietic stem cells blood
36 chr19:23931000-23933200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
37 chr19:23931000-23933600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr19:23931000-23934400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
39 chr19:23931000-23937800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr19:23931200-23934200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr19:23931400-23934600 Weak transcription Aorta Aorta
42 chr19:23931400-23935000 Weak transcription Adipose Nuclei Adipose
43 chr19:23931400-23940400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr19:23931600-23933200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:23931600-23940800 Weak transcription Placenta Placenta
46 chr19:23931600-23941000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr19:23931800-23933600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr19:23931800-23934200 Strong transcription Primary T helper naive cells from peripheral blood blood
49 chr19:23932000-23935800 Strong transcription Fetal Lung lung
50 chr19:23932200-23933000 ZNF genes & repeats Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015