Variant report

Variant rs4380159
Chromosome Location chr19:23837365-23837366
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23828000-23838800 Weak transcription Stomach Mucosa stomach
2 chr19:23832600-23865800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:23833400-23849800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:23833800-23849600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:23834000-23842600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
6 chr19:23834600-23839800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
7 chr19:23834600-23840800 Weak transcription Brain Anterior Caudate brain
8 chr19:23834800-23838000 Weak transcription Placenta Amnion Placenta Amnion
9 chr19:23835000-23846000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr19:23835200-23838800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr19:23835200-23841400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
12 chr19:23835200-23842400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
13 chr19:23835200-23843000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr19:23835200-23843200 ZNF genes & repeats Brain Germinal Matrix brain
15 chr19:23835200-23845200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
16 chr19:23835200-23845600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
17 chr19:23835200-23846400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:23835200-23846600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr19:23835200-23847400 ZNF genes & repeats Fetal Lung lung
20 chr19:23835200-23849800 ZNF genes & repeats Primary T cells from cord blood blood
21 chr19:23835200-23850400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
22 chr19:23835200-23856600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
23 chr19:23835200-23857200 ZNF genes & repeats Fetal Brain Female brain
24 chr19:23835400-23837600 Weak transcription Fetal Stomach stomach
25 chr19:23835400-23837800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr19:23835400-23838800 ZNF genes & repeats Fetal Brain Male brain
27 chr19:23835400-23841000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr19:23835400-23841400 ZNF genes & repeats H1 Cell Line embryonic stem cell
29 chr19:23835400-23842400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
30 chr19:23835400-23842800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
31 chr19:23835400-23846000 ZNF genes & repeats A549 lung
32 chr19:23835400-23846600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
33 chr19:23835400-23849800 ZNF genes & repeats Primary B cells from peripheral blood blood
34 chr19:23835400-23849800 ZNF genes & repeats Liver Liver
35 chr19:23835400-23849800 ZNF genes & repeats Dnd41 blood
36 chr19:23835400-23849800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
37 chr19:23835400-23850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr19:23835600-23838600 ZNF genes & repeats HepG2 liver
39 chr19:23835600-23839800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr19:23835600-23840000 ZNF genes & repeats HMEC breast
41 chr19:23835600-23841200 ZNF genes & repeats Primary B cells from cord blood blood
42 chr19:23835800-23837600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr19:23835800-23841000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
44 chr19:23835800-23841400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
45 chr19:23835800-23849800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
46 chr19:23836000-23837400 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr19:23836000-23838800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
48 chr19:23836000-23839200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr19:23836000-23840000 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
50 chr19:23836000-23843000 ZNF genes & repeats Adipose Nuclei Adipose

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