Variant report

Variant rs1818989
Chromosome Location chr19:23927468-23927469
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23922200-23933600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23923000-23940600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23924000-23929800 Weak transcription Rectal Smooth Muscle rectum
4 chr19:23924200-23930000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
5 chr19:23924200-23939600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:23924600-23933600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
7 chr19:23924600-23941000 Weak transcription Pancreas Pancrea
8 chr19:23925200-23928200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr19:23925400-23928000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr19:23925400-23929200 Weak transcription Colon Smooth Muscle Colon
11 chr19:23925400-23933000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
12 chr19:23925600-23928400 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr19:23925600-23930000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
14 chr19:23925800-23928000 Weak transcription Fetal Thymus thymus
15 chr19:23925800-23930200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:23925800-23930400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
17 chr19:23926000-23928200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
18 chr19:23926000-23930000 ZNF genes & repeats Liver Liver
19 chr19:23926000-23930000 ZNF genes & repeats Fetal Lung lung
20 chr19:23926000-23933600 ZNF genes & repeats Dnd41 blood
21 chr19:23926200-23927600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
22 chr19:23926200-23929800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr19:23926200-23929800 ZNF genes & repeats Fetal Brain Female brain
24 chr19:23926200-23932600 ZNF genes & repeats Primary B cells from peripheral blood blood
25 chr19:23926400-23928200 ZNF genes & repeats Duodenum Mucosa Duodenum
26 chr19:23926400-23928200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
27 chr19:23926400-23930000 ZNF genes & repeats Primary hematopoietic stem cells blood
28 chr19:23926400-23930000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr19:23926400-23930000 ZNF genes & repeats Adipose Nuclei Adipose
30 chr19:23926600-23928200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
31 chr19:23926600-23928400 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
32 chr19:23926600-23930000 ZNF genes & repeats H1 Cell Line embryonic stem cell
33 chr19:23926600-23930000 ZNF genes & repeats Primary B cells from cord blood blood
34 chr19:23926600-23930000 ZNF genes & repeats Primary T cells from cord blood blood
35 chr19:23926600-23930000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
36 chr19:23926600-23930200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr19:23926800-23927600 ZNF genes & repeats Brain Anterior Caudate brain
38 chr19:23926800-23927800 ZNF genes & repeats Brain Substantia Nigra brain
39 chr19:23926800-23927800 ZNF genes & repeats Fetal Brain Male brain
40 chr19:23926800-23928200 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
41 chr19:23926800-23929000 Weak transcription Left Ventricle heart
42 chr19:23926800-23929400 Weak transcription Aorta Aorta
43 chr19:23926800-23929800 ZNF genes & repeats Brain Germinal Matrix brain
44 chr19:23926800-23930000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
45 chr19:23926800-23930200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr19:23927000-23927600 ZNF genes & repeats Brain Hippocampus Middle brain
47 chr19:23927000-23927600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
48 chr19:23927000-23927600 Strong transcription Ovary ovary
49 chr19:23927000-23927800 ZNF genes & repeats K562 blood
50 chr19:23927000-23928200 ZNF genes & repeats NH-A brain

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