The 2.0 version of rSNPBase

Variant report

Variant rs6511527
Chromosome Location chr19:23946010-23946011
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23945000-23947000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:23945200-23946200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr19:23945200-23946600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr19:23945200-23946600 Active TSS Primary T cells from cord blood blood
5 chr19:23945200-23946600 Active TSS Primary T killer memory cells from peripheral blood blood
6 chr19:23945200-23946600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr19:23945200-23946600 Active TSS Brain Hippocampus Middle brain
8 chr19:23945200-23946600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr19:23945200-23946600 Active TSS Duodenum Smooth Muscle Duodenum
10 chr19:23945200-23946800 Active TSS Brain Anterior Caudate brain
11 chr19:23945200-23946800 Active TSS Right Ventricle heart
12 chr19:23945200-23946800 Active TSS Stomach Smooth Muscle stomach
13 chr19:23945200-23946800 Active TSS NHEK skin
14 chr19:23945200-23947000 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
15 chr19:23945200-23947000 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr19:23945200-23947000 Active TSS Rectal Mucosa Donor 31 rectum
17 chr19:23945200-23947200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:23945200-23947200 Active TSS GM12878-XiMat blood
19 chr19:23945200-23947400 Active TSS Colonic Mucosa Colon
20 chr19:23945200-23947400 Active TSS Rectal Smooth Muscle rectum
21 chr19:23945200-23947800 Active TSS Rectal Mucosa Donor 29 rectum
22 chr19:23945400-23946200 ZNF genes & repeats HSMMtube muscle
23 chr19:23945400-23946400 ZNF genes & repeats H1 Cell Line embryonic stem cell
24 chr19:23945400-23946400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
25 chr19:23945400-23946400 Active TSS Primary T helper naive cells from peripheral blood blood
26 chr19:23945400-23946400 Active TSS Primary T helper cells PMA-I stimulated --
27 chr19:23945400-23946400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
28 chr19:23945400-23946400 Active TSS Primary T killer naive cells fromperipheralblood blood
29 chr19:23945400-23946400 Active TSS Fetal Muscle Leg muscle
30 chr19:23945400-23946400 Active TSS Fetal Stomach stomach
31 chr19:23945400-23946600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr19:23945400-23946600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr19:23945400-23946600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr19:23945400-23946600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:23945400-23946600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr19:23945400-23946600 Active TSS Aorta Aorta
37 chr19:23945400-23946600 Active TSS Brain Angular Gyrus brain
38 chr19:23945400-23946600 Active TSS Brain Substantia Nigra brain
39 chr19:23945400-23946600 Active TSS Fetal Brain Female brain
40 chr19:23945400-23946600 Active TSS Left Ventricle heart
41 chr19:23945400-23946600 Active TSS Right Atrium heart
42 chr19:23945400-23946600 Active TSS Skeletal Muscle Male skeletal muscle
43 chr19:23945400-23946600 Active TSS Thymus Thymus
44 chr19:23945400-23946600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
45 chr19:23945400-23946600 Active TSS NH-A brain
46 chr19:23945400-23946600 Active TSS NHDF-Ad bronchial
47 chr19:23945400-23946600 Active TSS NHLF lung
48 chr19:23945400-23946600 Active TSS Osteobl bone
49 chr19:23945400-23946800 Flanking Active TSS Primary B cells from cord blood blood
50 chr19:23945400-23946800 Flanking Active TSS Adipose Nuclei Adipose

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Last update: Aug 31, 2015