The 2.0 version of rSNPBase

Variant report

Variant rs12608792
Chromosome Location chr19:23982595-23982596
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23965600-24000400 Weak transcription Pancreas Pancrea
2 chr19:23972400-23990000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr19:23972600-23989800 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr19:23972800-23998800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr19:23973800-23990200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr19:23973800-23993400 Weak transcription Aorta Aorta
7 chr19:23973800-24000400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr19:23973800-24001200 Weak transcription H9 Cell Line embryonic stem cell
9 chr19:23974200-23984000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr19:23974200-23987400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:23977000-23998000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr19:23978800-23984800 Weak transcription Fetal Lung lung
13 chr19:23980000-24000600 Weak transcription K562 blood
14 chr19:23980200-23983800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr19:23980200-23994800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr19:23980400-23982800 Enhancers Fetal Heart heart
17 chr19:23980400-23985600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr19:23982000-23982600 Active TSS Primary T cells from cord blood blood
19 chr19:23982000-23982600 Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr19:23982000-23982600 Active TSS Primary T killer memory cells from peripheral blood blood
21 chr19:23982000-23982600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr19:23982000-23982600 Active TSS Primary mononuclear cells fromperipheralblood Blood
23 chr19:23982000-23982800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:23982000-23982800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
25 chr19:23982000-23982800 Active TSS Thymus Thymus
26 chr19:23982000-23982800 Flanking Active TSS Dnd41 blood
27 chr19:23982000-23983400 Enhancers Primary hematopoietic stem cells blood
28 chr19:23982000-23983400 Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr19:23982000-23983800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr19:23982000-23985400 Enhancers Primary B cells from peripheral blood blood
31 chr19:23982000-23985600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:23982000-23997000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr19:23982200-23982600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
34 chr19:23982200-23982600 Active TSS Primary T killer naive cells fromperipheralblood blood
35 chr19:23982200-23982600 Enhancers Left Ventricle heart
36 chr19:23982200-23982600 Enhancers Right Atrium heart
37 chr19:23982200-23982800 Genic enhancers HUES6 Cell Line embryonic stem cell
38 chr19:23982200-23982800 Flanking Active TSS Primary B cells from cord blood blood
39 chr19:23982200-23982800 Active TSS Primary T cells fromperipheralblood blood
40 chr19:23982200-23982800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
41 chr19:23982200-23983400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr19:23982200-24004400 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr19:23982400-23982600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
44 chr19:23982400-23982600 Active TSS Pancreatic Islets Pancreatic Islet
45 chr19:23982400-23982600 Flanking Active TSS Fetal Thymus thymus
46 chr19:23982400-23982800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
47 chr19:23982400-23982800 Active TSS Primary T helper cells PMA-I stimulated --
48 chr19:23982400-23982800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr19:23982400-23983800 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015