The 2.0 version of rSNPBase

Variant report

Variant rs4932884
Chromosome Location chr19:23848975-23848976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23832600-23865800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:23833400-23849800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:23833800-23849600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23835200-23849800 ZNF genes & repeats Primary T cells from cord blood blood
5 chr19:23835200-23850400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
6 chr19:23835200-23856600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
7 chr19:23835200-23857200 ZNF genes & repeats Fetal Brain Female brain
8 chr19:23835400-23849800 ZNF genes & repeats Primary B cells from peripheral blood blood
9 chr19:23835400-23849800 ZNF genes & repeats Liver Liver
10 chr19:23835400-23849800 ZNF genes & repeats Dnd41 blood
11 chr19:23835400-23849800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
12 chr19:23835400-23850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr19:23835800-23849800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
14 chr19:23836200-23849800 ZNF genes & repeats Primary hematopoietic stem cells blood
15 chr19:23836200-23850000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
16 chr19:23839200-23855200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:23841400-23869200 Weak transcription Gastric stomach
18 chr19:23842200-23849800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
19 chr19:23842400-23850000 ZNF genes & repeats Fetal Stomach stomach
20 chr19:23844000-23849000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr19:23844000-23849800 ZNF genes & repeats Brain Germinal Matrix brain
22 chr19:23844200-23850000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:23845000-23849400 Weak transcription HSMMtube muscle
24 chr19:23845000-23864000 Weak transcription Brain Substantia Nigra brain
25 chr19:23845200-23855600 Weak transcription Psoas Muscle Psoas
26 chr19:23845400-23851000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr19:23845400-23868200 Weak transcription HSMM muscle
28 chr19:23845600-23849000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr19:23845600-23851000 Weak transcription Colon Smooth Muscle Colon
30 chr19:23845600-23851600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr19:23845600-23852400 Weak transcription HepG2 liver
32 chr19:23845600-23856000 Weak transcription Stomach Mucosa stomach
33 chr19:23845600-23867600 Weak transcription Brain Cingulate Gyrus brain
34 chr19:23845600-23868200 Weak transcription Hela-S3 cervix
35 chr19:23845600-23868400 Weak transcription Fetal Kidney kidney
36 chr19:23845800-23863800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr19:23845800-23864000 Weak transcription Brain Hippocampus Middle brain
38 chr19:23845800-23869000 Weak transcription Placenta Placenta
39 chr19:23846000-23849000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr19:23846000-23849800 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr19:23846000-23868600 Weak transcription Brain Anterior Caudate brain
42 chr19:23846200-23849000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr19:23846200-23849000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr19:23846200-23851000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr19:23846400-23850800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr19:23846400-23851200 Weak transcription Ovary ovary
47 chr19:23846400-23853800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
48 chr19:23846400-23863800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr19:23846600-23851400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr19:23846600-23854600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015