The 2.0 version of rSNPBase

Variant report

Variant rs1968021
Chromosome Location chr19:23868712-23868713
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23841400-23869200 Weak transcription Gastric stomach
2 chr19:23845800-23869000 Weak transcription Placenta Placenta
3 chr19:23848600-23869000 Weak transcription Aorta Aorta
4 chr19:23852000-23869200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:23852200-23869200 Weak transcription Esophagus oesophagus
6 chr19:23853600-23869400 Weak transcription Spleen Spleen
7 chr19:23864400-23869200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr19:23864400-23869200 Weak transcription Colonic Mucosa Colon
9 chr19:23864400-23869200 Weak transcription Lung lung
10 chr19:23864600-23868800 Weak transcription Liver Liver
11 chr19:23864600-23868800 Weak transcription Brain Substantia Nigra brain
12 chr19:23864600-23869000 Weak transcription Fetal Muscle Trunk muscle
13 chr19:23864600-23869200 Weak transcription Pancreas Pancrea
14 chr19:23865400-23868800 ZNF genes & repeats A549 lung
15 chr19:23865600-23869200 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr19:23865800-23868800 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr19:23867000-23868800 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr19:23867200-23868800 Enhancers Primary T cells fromperipheralblood blood
19 chr19:23867200-23868800 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr19:23867400-23868800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
21 chr19:23867400-23868800 Transcr. at gene 5' and 3' Dnd41 blood
22 chr19:23867400-23869000 Enhancers Primary B cells from peripheral blood blood
23 chr19:23867600-23868800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr19:23867600-23868800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr19:23867600-23869200 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr19:23867800-23868800 Enhancers Right Ventricle heart
27 chr19:23868000-23868800 Enhancers Primary B cells from cord blood blood
28 chr19:23868000-23868800 Weak transcription Fetal Stomach stomach
29 chr19:23868000-23869000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr19:23868000-23870200 Active TSS Rectal Mucosa Donor 29 rectum
31 chr19:23868200-23868800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
32 chr19:23868200-23868800 Weak transcription Primary monocytes fromperipheralblood blood
33 chr19:23868200-23868800 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr19:23868200-23869000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr19:23868200-23869000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
36 chr19:23868200-23869200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr19:23868200-23869200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
38 chr19:23868200-23869200 Enhancers Colon Smooth Muscle Colon
39 chr19:23868200-23870000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr19:23868200-23870200 Active TSS H1 Cell Line embryonic stem cell
41 chr19:23868200-23870200 Active TSS HUES6 Cell Line embryonic stem cell
42 chr19:23868200-23870200 Active TSS iPS-20b Cell Line embryonic stem cell
43 chr19:23868400-23868800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
44 chr19:23868400-23868800 Enhancers Primary T helper cells fromperipheralblood blood
45 chr19:23868400-23868800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr19:23868400-23868800 Flanking Active TSS Muscle Satellite Cultured Cells --
47 chr19:23868400-23868800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
48 chr19:23868400-23869000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr19:23868400-23869000 Flanking Active TSS Primary T cells from cord blood blood
50 chr19:23868400-23869000 Flanking Active TSS Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015