The 2.0 version of rSNPBase

Variant report

Variant rs8104838
Chromosome Location chr19:23953181-23953182
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23946600-23956800 Weak transcription Gastric stomach
2 chr19:23946600-23960200 Weak transcription Spleen Spleen
3 chr19:23946600-23964600 Weak transcription Left Ventricle heart
4 chr19:23946600-23966000 Weak transcription Brain Cingulate Gyrus brain
5 chr19:23946800-23953400 Weak transcription Pancreas Pancrea
6 chr19:23946800-23953600 Weak transcription Placenta Placenta
7 chr19:23946800-23954200 Weak transcription Fetal Intestine Large intestine
8 chr19:23946800-23955000 Weak transcription NHEK skin
9 chr19:23946800-23956800 Weak transcription Fetal Muscle Leg muscle
10 chr19:23946800-23956800 Weak transcription Ovary ovary
11 chr19:23946800-23957000 Weak transcription Esophagus oesophagus
12 chr19:23946800-23957400 Weak transcription Adipose Nuclei Adipose
13 chr19:23946800-23959000 Weak transcription Fetal Muscle Trunk muscle
14 chr19:23946800-23959400 Weak transcription Brain Anterior Caudate brain
15 chr19:23946800-23962200 Weak transcription Placenta Amnion Placenta Amnion
16 chr19:23946800-23963800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr19:23946800-23964400 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr19:23946800-23966000 Weak transcription Primary T cells fromperipheralblood blood
19 chr19:23946800-23973000 Weak transcription Brain Hippocampus Middle brain
20 chr19:23947000-23954800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr19:23947000-23957400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:23947000-23966000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:23947200-23956600 Weak transcription Primary hematopoietic stem cells blood
24 chr19:23947200-23959800 Weak transcription Fetal Heart heart
25 chr19:23947200-23960000 Weak transcription Fetal Lung lung
26 chr19:23947200-23960400 Weak transcription Fetal Kidney kidney
27 chr19:23947200-23978200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr19:23947400-23954600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr19:23947400-23959400 Weak transcription Colonic Mucosa Colon
30 chr19:23947400-23973000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr19:23947400-23973800 Weak transcription Rectal Smooth Muscle rectum
32 chr19:23947600-23964800 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr19:23947800-23956800 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr19:23947800-23959800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:23948000-23954800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr19:23948000-23969000 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr19:23948000-23972400 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr19:23948000-23976600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr19:23948200-23975600 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr19:23948400-23956400 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr19:23948400-23961400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr19:23948600-23954600 Weak transcription Dnd41 blood
43 chr19:23948600-23959200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr19:23948800-23955200 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr19:23949600-23955600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr19:23949600-23972600 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:23949800-23975000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr19:23950000-23955000 Weak transcription Fetal Intestine Small intestine
49 chr19:23950200-23958800 Weak transcription Fetal Stomach stomach
50 chr19:23950200-23959200 Strong transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015