The 2.0 version of rSNPBase

Variant report

Variant rs4932901
Chromosome Location chr19:23868408-23868409
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23841400-23869200 Weak transcription Gastric stomach
2 chr19:23845800-23869000 Weak transcription Placenta Placenta
3 chr19:23846000-23868600 Weak transcription Brain Anterior Caudate brain
4 chr19:23848600-23869000 Weak transcription Aorta Aorta
5 chr19:23852000-23869200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr19:23852200-23869200 Weak transcription Esophagus oesophagus
7 chr19:23853600-23869400 Weak transcription Spleen Spleen
8 chr19:23861400-23868600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr19:23861800-23868600 Weak transcription NH-A brain
10 chr19:23862400-23868600 Weak transcription Adipose Nuclei Adipose
11 chr19:23864000-23868600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:23864200-23868600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr19:23864400-23868600 Weak transcription Fetal Thymus thymus
14 chr19:23864400-23868600 Weak transcription Placenta Amnion Placenta Amnion
15 chr19:23864400-23869200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr19:23864400-23869200 Weak transcription Colonic Mucosa Colon
17 chr19:23864400-23869200 Weak transcription Lung lung
18 chr19:23864600-23868600 Weak transcription Brain Hippocampus Middle brain
19 chr19:23864600-23868800 Weak transcription Liver Liver
20 chr19:23864600-23868800 Weak transcription Brain Substantia Nigra brain
21 chr19:23864600-23869000 Weak transcription Fetal Muscle Trunk muscle
22 chr19:23864600-23869200 Weak transcription Pancreas Pancrea
23 chr19:23864800-23868600 Weak transcription Osteobl bone
24 chr19:23865400-23868800 ZNF genes & repeats A549 lung
25 chr19:23865600-23869200 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr19:23865800-23868600 Weak transcription Fetal Muscle Leg muscle
27 chr19:23865800-23868800 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr19:23866000-23868600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr19:23866000-23868600 Weak transcription Fetal Intestine Large intestine
30 chr19:23866000-23868600 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr19:23866200-23868600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr19:23866400-23868600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr19:23867000-23868800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr19:23867200-23868800 Enhancers Primary T cells fromperipheralblood blood
35 chr19:23867200-23868800 Enhancers Primary T killer naive cells fromperipheralblood blood
36 chr19:23867400-23868600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr19:23867400-23868600 Weak transcription Fetal Intestine Small intestine
38 chr19:23867400-23868800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
39 chr19:23867400-23868800 Transcr. at gene 5' and 3' Dnd41 blood
40 chr19:23867400-23869000 Enhancers Primary B cells from peripheral blood blood
41 chr19:23867600-23868600 Enhancers Brain Cingulate Gyrus brain
42 chr19:23867600-23868600 Enhancers HepG2 liver
43 chr19:23867600-23868800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr19:23867600-23868800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
45 chr19:23867600-23869200 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr19:23867800-23868600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr19:23867800-23868600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr19:23867800-23868600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr19:23867800-23868600 Enhancers Brain Angular Gyrus brain
50 chr19:23867800-23868600 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015