Variant report

Variant rs4560039
Chromosome Location chr19:23835601-23835602
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23828000-23838800 Weak transcription Stomach Mucosa stomach
2 chr19:23832600-23865800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:23833000-23836400 Weak transcription Placenta Placenta
4 chr19:23833000-23836600 Weak transcription K562 blood
5 chr19:23833200-23836200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr19:23833400-23849800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:23833800-23836400 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr19:23833800-23849600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:23834000-23842600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
10 chr19:23834400-23836000 Weak transcription NH-A brain
11 chr19:23834400-23836600 Weak transcription Rectal Smooth Muscle rectum
12 chr19:23834600-23839800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
13 chr19:23834600-23840800 Weak transcription Brain Anterior Caudate brain
14 chr19:23834800-23836400 Weak transcription Fetal Thymus thymus
15 chr19:23834800-23836400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr19:23834800-23838000 Weak transcription Placenta Amnion Placenta Amnion
17 chr19:23835000-23836000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr19:23835000-23836600 Weak transcription Stomach Smooth Muscle stomach
19 chr19:23835000-23846000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr19:23835200-23836200 Weak transcription Left Ventricle heart
21 chr19:23835200-23838800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:23835200-23841400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
23 chr19:23835200-23842400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
24 chr19:23835200-23843000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:23835200-23843200 ZNF genes & repeats Brain Germinal Matrix brain
26 chr19:23835200-23845200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
27 chr19:23835200-23845600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
28 chr19:23835200-23846400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr19:23835200-23846600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr19:23835200-23847400 ZNF genes & repeats Fetal Lung lung
31 chr19:23835200-23849800 ZNF genes & repeats Primary T cells from cord blood blood
32 chr19:23835200-23850400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
33 chr19:23835200-23856600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
34 chr19:23835200-23857200 ZNF genes & repeats Fetal Brain Female brain
35 chr19:23835400-23836000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr19:23835400-23837200 Strong transcription Brain Hippocampus Middle brain
37 chr19:23835400-23837600 Weak transcription Fetal Stomach stomach
38 chr19:23835400-23837800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr19:23835400-23838800 ZNF genes & repeats Fetal Brain Male brain
40 chr19:23835400-23841000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr19:23835400-23841400 ZNF genes & repeats H1 Cell Line embryonic stem cell
42 chr19:23835400-23842400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
43 chr19:23835400-23842800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
44 chr19:23835400-23846000 ZNF genes & repeats A549 lung
45 chr19:23835400-23846600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
46 chr19:23835400-23849800 ZNF genes & repeats Primary B cells from peripheral blood blood
47 chr19:23835400-23849800 ZNF genes & repeats Liver Liver
48 chr19:23835400-23849800 ZNF genes & repeats Dnd41 blood
49 chr19:23835400-23849800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
50 chr19:23835400-23850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --

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