The 2.0 version of rSNPBase

Variant report

Variant rs12979066
Chromosome Location chr19:23944072-23944073
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23941800-23945000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:23941800-23945000 Weak transcription Aorta Aorta
3 chr19:23941800-23945000 Weak transcription Esophagus oesophagus
4 chr19:23941800-23945000 Weak transcription Placenta Placenta
5 chr19:23941800-23945000 Weak transcription Pancreas Pancrea
6 chr19:23941800-23945200 Weak transcription Primary hematopoietic stem cells blood
7 chr19:23941800-23945200 Weak transcription Spleen Spleen
8 chr19:23941800-23945400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr19:23941800-23945600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr19:23941800-23945600 Weak transcription Placenta Amnion Placenta Amnion
11 chr19:23942000-23944400 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr19:23942000-23945000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr19:23942000-23945000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr19:23942000-23945000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr19:23942000-23945200 Weak transcription Adipose Nuclei Adipose
16 chr19:23942000-23945200 Weak transcription Brain Cingulate Gyrus brain
17 chr19:23942000-23945200 Weak transcription Brain Substantia Nigra brain
18 chr19:23942000-23945200 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr19:23942000-23945200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr19:23942000-23945400 Weak transcription Fetal Kidney kidney
21 chr19:23942000-23945400 Weak transcription HSMMtube muscle
22 chr19:23942200-23945000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr19:23942200-23945000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr19:23942200-23945000 Weak transcription Duodenum Mucosa Duodenum
25 chr19:23942200-23945000 Weak transcription Fetal Stomach stomach
26 chr19:23942200-23945200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr19:23942200-23945200 Weak transcription Primary B cells from cord blood blood
28 chr19:23942200-23945200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr19:23942200-23945200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr19:23942200-23945200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:23942200-23945200 Weak transcription Brain Angular Gyrus brain
32 chr19:23942200-23945200 Weak transcription Brain Hippocampus Middle brain
33 chr19:23942200-23945200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr19:23942200-23945200 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr19:23942200-23945200 Weak transcription Right Ventricle heart
36 chr19:23942200-23945200 Weak transcription Stomach Smooth Muscle stomach
37 chr19:23942200-23945400 Weak transcription Brain Germinal Matrix brain
38 chr19:23942200-23945400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr19:23942200-23945400 Weak transcription Fetal Brain Male brain
40 chr19:23942200-23945400 Weak transcription Fetal Thymus thymus
41 chr19:23942200-23945400 Weak transcription Left Ventricle heart
42 chr19:23942200-23945400 Weak transcription K562 blood
43 chr19:23942200-23945600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr19:23942200-23945600 Weak transcription Gastric stomach
45 chr19:23942200-23945600 Weak transcription Lung lung
46 chr19:23942200-23945800 Weak transcription Fetal Heart heart
47 chr19:23942400-23945000 Weak transcription Fetal Muscle Trunk muscle
48 chr19:23942400-23945200 Weak transcription Brain Anterior Caudate brain
49 chr19:23942400-23945200 Weak transcription Fetal Muscle Leg muscle
50 chr19:23943000-23945000 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015