The 2.0 version of rSNPBase

Variant report

Variant rs11112961
Chromosome Location chr12:106779896-106779897
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106752400-106791600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:106752600-106781800 Weak transcription H9 Cell Line embryonic stem cell
3 chr12:106753000-106788800 Weak transcription Thymus Thymus
4 chr12:106753000-106791600 Weak transcription Esophagus oesophagus
5 chr12:106753000-106793200 Weak transcription Colon Smooth Muscle Colon
6 chr12:106753000-106811800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr12:106753000-106815400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr12:106755000-106784600 Weak transcription Pancreas Pancrea
9 chr12:106755000-106789000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr12:106755400-106796400 Weak transcription Spleen Spleen
11 chr12:106763800-106781400 Weak transcription Placenta Amnion Placenta Amnion
12 chr12:106763800-106783400 Weak transcription Fetal Brain Male brain
13 chr12:106764000-106821000 Weak transcription Rectal Smooth Muscle rectum
14 chr12:106764200-106786400 Weak transcription NHLF lung
15 chr12:106764400-106811800 Weak transcription HUVEC blood vessel
16 chr12:106765000-106781400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr12:106765000-106790600 Weak transcription H1 Cell Line embryonic stem cell
18 chr12:106767200-106808600 Weak transcription NHDF-Ad bronchial
19 chr12:106770800-106787400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr12:106772400-106789200 Weak transcription HepG2 liver
21 chr12:106773000-106828000 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr12:106773200-106780800 Weak transcription Hela-S3 cervix
23 chr12:106773200-106786600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr12:106773200-106786600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr12:106773200-106786600 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr12:106773200-106789800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr12:106773200-106808600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr12:106773800-106786600 Weak transcription K562 blood
29 chr12:106774200-106786600 Weak transcription NH-A brain
30 chr12:106774400-106834000 Weak transcription Small Intestine intestine
31 chr12:106774600-106791600 Weak transcription Fetal Thymus thymus
32 chr12:106774600-106819000 Weak transcription Right Ventricle heart
33 chr12:106774800-106811800 Weak transcription NHEK skin
34 chr12:106775000-106786400 Weak transcription GM12878-XiMat blood
35 chr12:106775000-106786600 Weak transcription Stomach Smooth Muscle stomach
36 chr12:106775200-106781400 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr12:106775200-106786600 Weak transcription Fetal Intestine Large intestine
38 chr12:106775400-106786800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr12:106775600-106788200 Weak transcription Brain Hippocampus Middle brain
40 chr12:106776000-106784600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr12:106776000-106786800 Weak transcription Gastric stomach
42 chr12:106776200-106781400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr12:106776200-106790400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr12:106776400-106780200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr12:106776400-106781600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr12:106776400-106786600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:106776400-106788200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr12:106776600-106782600 Weak transcription Fetal Heart heart
49 chr12:106776600-106786800 Weak transcription Brain Inferior Temporal Lobe brain
50 chr12:106776600-106786800 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015