The 2.0 version of rSNPBase

Variant report

Variant rs11113004
Chromosome Location chr12:106859465-106859466
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106813000-106864800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:106813200-106864800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:106824800-106866400 Weak transcription NHLF lung
4 chr12:106828600-106905800 Weak transcription Rectal Smooth Muscle rectum
5 chr12:106829000-106867200 Weak transcription Colon Smooth Muscle Colon
6 chr12:106830400-106864600 Weak transcription Placenta Amnion Placenta Amnion
7 chr12:106830400-106865800 Weak transcription K562 blood
8 chr12:106833000-106864400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr12:106840000-106864600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr12:106841800-106865000 Weak transcription A549 lung
11 chr12:106846400-106864000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr12:106846400-106864600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr12:106851000-106864800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr12:106851600-106860600 Weak transcription HUVEC blood vessel
15 chr12:106851800-106864600 Weak transcription Primary B cells from peripheral blood blood
16 chr12:106852600-106867200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr12:106853200-106860800 Weak transcription HMEC breast
18 chr12:106853400-106865000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:106853400-106886400 Weak transcription Fetal Kidney kidney
20 chr12:106853600-106864000 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr12:106853600-106864800 Weak transcription H1 Cell Line embryonic stem cell
22 chr12:106854000-106864600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr12:106854000-106864600 Weak transcription Brain Angular Gyrus brain
24 chr12:106854000-106865000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr12:106854200-106860200 Weak transcription Primary hematopoietic stem cells blood
26 chr12:106854200-106864600 Weak transcription Fetal Brain Female brain
27 chr12:106854200-106886800 Weak transcription Brain Hippocampus Middle brain
28 chr12:106854400-106860600 Weak transcription Brain Cingulate Gyrus brain
29 chr12:106854400-106863600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr12:106854400-106864800 Weak transcription Dnd41 blood
31 chr12:106854400-106865200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr12:106854400-106865400 Weak transcription Brain Substantia Nigra brain
33 chr12:106854400-106874000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr12:106854400-106904800 Weak transcription HSMM muscle
35 chr12:106854600-106859600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:106854600-106872000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:106854600-106899800 Weak transcription Fetal Thymus thymus
38 chr12:106854800-106859800 Weak transcription NH-A brain
39 chr12:106854800-106864800 Weak transcription Fetal Lung lung
40 chr12:106854800-106867000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr12:106854800-106874800 Weak transcription HepG2 liver
42 chr12:106855000-106864800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:106855400-106865200 Weak transcription Brain Germinal Matrix brain
44 chr12:106855600-106861400 Weak transcription Hela-S3 cervix
45 chr12:106855800-106864400 Weak transcription Brain Anterior Caudate brain
46 chr12:106855800-106865600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr12:106855800-106895600 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr12:106855800-106896200 Weak transcription Thymus Thymus
49 chr12:106856000-106864200 Weak transcription Fetal Intestine Large intestine
50 chr12:106856000-106864400 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015