The 2.0 version of rSNPBase

Variant report

Variant rs10861580
Chromosome Location chr12:106754710-106754711
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106752400-106754800 Weak transcription Spleen Spleen
2 chr12:106752400-106755200 Flanking Active TSS Liver Liver
3 chr12:106752400-106775400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:106752400-106791600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:106752600-106781800 Weak transcription H9 Cell Line embryonic stem cell
6 chr12:106752800-106754800 Enhancers Stomach Mucosa stomach
7 chr12:106752800-106755000 Enhancers Pancreas Pancrea
8 chr12:106752800-106757800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:106752800-106757800 Weak transcription Primary T cells from cord blood blood
10 chr12:106752800-106758200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr12:106752800-106760000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:106752800-106763200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr12:106752800-106763200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr12:106752800-106763200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr12:106752800-106763200 Weak transcription Fetal Brain Male brain
16 chr12:106752800-106763400 Weak transcription H1 Cell Line embryonic stem cell
17 chr12:106752800-106763400 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr12:106752800-106763400 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr12:106752800-106772200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr12:106752800-106775800 Weak transcription Aorta Aorta
21 chr12:106753000-106754800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr12:106753000-106757600 Weak transcription Primary T cells fromperipheralblood blood
23 chr12:106753000-106757800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:106753000-106757800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr12:106753000-106757800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr12:106753000-106757800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:106753000-106757800 Weak transcription HSMMtube muscle
28 chr12:106753000-106758000 Weak transcription Brain Anterior Caudate brain
29 chr12:106753000-106758000 Enhancers Placenta Placenta
30 chr12:106753000-106758000 Weak transcription Fetal Stomach stomach
31 chr12:106753000-106758000 Weak transcription Stomach Smooth Muscle stomach
32 chr12:106753000-106758000 Weak transcription HSMM muscle
33 chr12:106753000-106759800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr12:106753000-106760200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr12:106753000-106760200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr12:106753000-106760200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr12:106753000-106761200 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr12:106753000-106761400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr12:106753000-106761400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr12:106753000-106763000 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr12:106753000-106763000 Weak transcription Primary B cells from cord blood blood
42 chr12:106753000-106763000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:106753000-106763000 Weak transcription HMEC breast
44 chr12:106753000-106763000 Weak transcription NHLF lung
45 chr12:106753000-106763200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:106753000-106763200 Weak transcription Primary B cells from peripheral blood blood
47 chr12:106753000-106763200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr12:106753000-106763200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr12:106753000-106763200 Weak transcription Brain Cingulate Gyrus brain
50 chr12:106753000-106763200 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015