The 2.0 version of rSNPBase

Variant report

Variant rs7315549
Chromosome Location chr12:106791972-106791973
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106753000-106793200 Weak transcription Colon Smooth Muscle Colon
2 chr12:106753000-106811800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:106753000-106815400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr12:106755400-106796400 Weak transcription Spleen Spleen
5 chr12:106764000-106821000 Weak transcription Rectal Smooth Muscle rectum
6 chr12:106764400-106811800 Weak transcription HUVEC blood vessel
7 chr12:106767200-106808600 Weak transcription NHDF-Ad bronchial
8 chr12:106773000-106828000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr12:106773200-106808600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr12:106774400-106834000 Weak transcription Small Intestine intestine
11 chr12:106774600-106819000 Weak transcription Right Ventricle heart
12 chr12:106774800-106811800 Weak transcription NHEK skin
13 chr12:106776800-106793400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr12:106776800-106821800 Weak transcription Brain Angular Gyrus brain
15 chr12:106777400-106808200 Weak transcription Primary B cells from peripheral blood blood
16 chr12:106779600-106821800 Weak transcription Brain Substantia Nigra brain
17 chr12:106781200-106799600 Weak transcription Osteobl bone
18 chr12:106782000-106810000 Weak transcription Placenta Amnion Placenta Amnion
19 chr12:106783600-106818800 Weak transcription Fetal Heart heart
20 chr12:106786400-106792000 Strong transcription Primary T cells fromperipheralblood blood
21 chr12:106786600-106792000 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr12:106786600-106792000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr12:106786600-106792000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr12:106786600-106792000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr12:106786600-106792000 Strong transcription Fetal Muscle Trunk muscle
26 chr12:106786800-106792000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr12:106786800-106792000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:106786800-106793000 Strong transcription Fetal Adrenal Gland Adrenal Gland
29 chr12:106787000-106830200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr12:106787200-106793200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr12:106787200-106808600 Weak transcription NHLF lung
32 chr12:106787600-106808400 Weak transcription Psoas Muscle Psoas
33 chr12:106787600-106856600 Weak transcription GM12878-XiMat blood
34 chr12:106787800-106793600 Weak transcription Colonic Mucosa Colon
35 chr12:106787800-106852400 Weak transcription Gastric stomach
36 chr12:106787800-106852800 Weak transcription Pancreas Pancrea
37 chr12:106788000-106827200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr12:106788600-106799800 Weak transcription K562 blood
39 chr12:106789000-106808800 Weak transcription HMEC breast
40 chr12:106789000-106829800 Weak transcription Brain Hippocampus Middle brain
41 chr12:106789200-106804000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr12:106789200-106805800 Weak transcription Left Ventricle heart
43 chr12:106789200-106807400 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr12:106789200-106811800 Weak transcription Brain Cingulate Gyrus brain
45 chr12:106789200-106821400 Weak transcription Stomach Smooth Muscle stomach
46 chr12:106789400-106808200 Weak transcription Fetal Kidney kidney
47 chr12:106789400-106808400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr12:106789400-106808600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr12:106789400-106812400 Weak transcription Brain Anterior Caudate brain
50 chr12:106789400-106819000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015