The 2.0 version of rSNPBase

Variant report

Variant rs11120087
Chromosome Location chr1:213264764-213264765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
2 chr1:213240200-213272600 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:213244200-213268000 Weak transcription Brain Substantia Nigra brain
5 chr1:213244200-213271000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:213244200-213273200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:213244200-213273200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:213244200-213296200 Weak transcription NHDF-Ad bronchial
9 chr1:213246800-213283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:213251200-213293000 Weak transcription NH-A brain
11 chr1:213251600-213272000 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr1:213252600-213297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:213253000-213271200 Weak transcription Small Intestine intestine
14 chr1:213253200-213275600 Weak transcription Colon Smooth Muscle Colon
15 chr1:213253200-213277600 Weak transcription Gastric stomach
16 chr1:213254800-213297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:213255200-213264800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:213255200-213266000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:213255200-213270800 Weak transcription GM12878-XiMat blood
20 chr1:213255200-213273400 Weak transcription Fetal Brain Male brain
21 chr1:213255200-213279400 Weak transcription Rectal Smooth Muscle rectum
22 chr1:213255400-213267200 Weak transcription Brain Hippocampus Middle brain
23 chr1:213255400-213270400 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr1:213255600-213271800 Weak transcription Right Ventricle heart
25 chr1:213256800-213284000 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:213258400-213280600 Weak transcription A549 lung
27 chr1:213258600-213267200 Weak transcription Brain Cingulate Gyrus brain
28 chr1:213258600-213271000 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr1:213258600-213277400 Weak transcription Psoas Muscle Psoas
30 chr1:213258800-213284200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:213259200-213265200 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:213259600-213270600 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:213259800-213267200 Weak transcription Brain Anterior Caudate brain
34 chr1:213259800-213267800 Weak transcription Ovary ovary
35 chr1:213259800-213269000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:213259800-213284000 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:213260000-213269000 Weak transcription HMEC breast
38 chr1:213261400-213269200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:213261400-213280800 Weak transcription Primary T cells from cord blood blood
40 chr1:213261400-213280800 Weak transcription Stomach Mucosa stomach
41 chr1:213261400-213284000 Weak transcription Duodenum Mucosa Duodenum
42 chr1:213261600-213265200 Weak transcription Brain Angular Gyrus brain
43 chr1:213261600-213266800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:213261600-213267000 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:213261600-213268000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:213261600-213269000 Weak transcription Dnd41 blood
47 chr1:213261600-213269400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:213261600-213270000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:213261600-213270600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr1:213261600-213272000 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015