The 2.0 version of rSNPBase

Variant report

Variant rs12087445
Chromosome Location chr1:213258372-213258373
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213228800-213263200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
3 chr1:213233000-213262600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:213234800-213261000 Weak transcription Stomach Mucosa stomach
5 chr1:213240200-213272600 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:213240400-213261600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:213240600-213261200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:213241000-213259400 Weak transcription Brain Anterior Caudate brain
10 chr1:213241200-213261000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:213243000-213259800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:213243800-213262600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:213244000-213258400 Weak transcription Psoas Muscle Psoas
14 chr1:213244200-213268000 Weak transcription Brain Substantia Nigra brain
15 chr1:213244200-213271000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:213244200-213273200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:213244200-213273200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:213244200-213296200 Weak transcription NHDF-Ad bronchial
19 chr1:213246600-213259400 Weak transcription Pancreas Pancrea
20 chr1:213246800-213283800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:213251200-213259400 Weak transcription NHLF lung
22 chr1:213251200-213293000 Weak transcription NH-A brain
23 chr1:213251400-213263800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:213251600-213259400 Weak transcription Spleen Spleen
25 chr1:213251600-213272000 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr1:213252400-213261000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:213252400-213264400 Weak transcription H9 Cell Line embryonic stem cell
28 chr1:213252600-213262200 Strong transcription Primary monocytes fromperipheralblood blood
29 chr1:213252600-213297200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:213252800-213262000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:213252800-213263600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:213253000-213263000 Weak transcription Colonic Mucosa Colon
33 chr1:213253000-213263200 Weak transcription Thymus Thymus
34 chr1:213253000-213271200 Weak transcription Small Intestine intestine
35 chr1:213253200-213260800 Weak transcription Fetal Thymus thymus
36 chr1:213253200-213262800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:213253200-213275600 Weak transcription Colon Smooth Muscle Colon
38 chr1:213253200-213277600 Weak transcription Gastric stomach
39 chr1:213253600-213262800 Strong transcription Adipose Nuclei Adipose
40 chr1:213254000-213258600 Strong transcription Primary T cells from cord blood blood
41 chr1:213254000-213260200 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr1:213254000-213261000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:213254000-213261800 Strong transcription Fetal Muscle Leg muscle
44 chr1:213254600-213259400 Strong transcription Primary B cells from peripheral blood blood
45 chr1:213254800-213297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:213255000-213259400 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:213255000-213261000 Weak transcription HSMMtube muscle
48 chr1:213255200-213260800 Weak transcription Dnd41 blood
49 chr1:213255200-213264800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:213255200-213266000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015