The 2.0 version of rSNPBase

Variant report

Variant rs12064585
Chromosome Location chr1:213242952-213242953
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213225200-213253400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:213225200-213254400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:213225400-213254000 Weak transcription Aorta Aorta
4 chr1:213225400-213254000 Weak transcription Left Ventricle heart
5 chr1:213225400-213256600 Weak transcription Ovary ovary
6 chr1:213225600-213243600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:213225600-213244000 Weak transcription HSMM muscle
8 chr1:213225800-213252800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:213225800-213254000 Weak transcription Primary T cells from cord blood blood
10 chr1:213226000-213254000 Weak transcription Fetal Muscle Leg muscle
11 chr1:213226200-213243800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:213226200-213252800 Weak transcription Fetal Stomach stomach
13 chr1:213227000-213254000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:213227200-213243000 Weak transcription Primary hematopoietic stem cells blood
15 chr1:213228000-213254200 Weak transcription Brain Hippocampus Middle brain
16 chr1:213228600-213244000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr1:213228800-213263200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:213229400-213254200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:213229400-213283400 Weak transcription Hela-S3 cervix
20 chr1:213231600-213254000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:213232800-213254200 Weak transcription HepG2 liver
22 chr1:213233000-213262600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:213234400-213252800 Weak transcription Fetal Intestine Small intestine
24 chr1:213234800-213243200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:213234800-213243400 Weak transcription GM12878-XiMat blood
26 chr1:213234800-213261000 Weak transcription Stomach Mucosa stomach
27 chr1:213235000-213254200 Weak transcription Primary B cells from cord blood blood
28 chr1:213235200-213243800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:213237400-213252800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:213238000-213243600 Weak transcription Fetal Lung lung
31 chr1:213239200-213243400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:213239200-213254400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr1:213240000-213243000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:213240000-213243800 Weak transcription Primary B cells from peripheral blood blood
35 chr1:213240000-213254000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:213240200-213243400 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:213240200-213243600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr1:213240200-213272600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:213240400-213254400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:213240400-213261600 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:213240400-213274600 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:213240600-213261200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:213240800-213243800 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:213241000-213259400 Weak transcription Brain Anterior Caudate brain
45 chr1:213241200-213243200 Weak transcription NHDF-Ad bronchial
46 chr1:213241200-213261000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:213241400-213254200 Weak transcription Right Ventricle heart
48 chr1:213242600-213243000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr1:213242600-213243000 Flanking Active TSS K562 blood
50 chr1:213242600-213243800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015