Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:54619811..54622044-chr4:54627656..54629607,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1013508	0.92[EUR][1000 genomes]
rs1013509	0.89[EUR][1000 genomes]
rs11133287	0.92[EUR][1000 genomes]
rs11133288	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11726943	0.88[ASN][1000 genomes]
rs12645847	0.95[ASN][1000 genomes]
rs12646885	0.84[EUR][1000 genomes]
rs2412496	0.92[EUR][1000 genomes]
rs2590764	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2590765	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2590766	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2616432	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4305579	0.87[ASN][1000 genomes]
rs55705508	0.94[ASN][1000 genomes]
rs56061807	0.89[EUR][1000 genomes]
rs67780867	0.84[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs6819547	0.93[AFR][1000 genomes]
rs6829218	0.94[ASN][1000 genomes]
rs6850939	0.85[EUR][1000 genomes]
rs6851383	0.89[ASN][1000 genomes]
rs7686706	0.92[EUR][1000 genomes]
rs7699690	0.84[ASN][1000 genomes]
rs872968	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879015	chr4:54596466-54665559	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv521350	chr4:54621715-54629262	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv527173	chr4:54626228-54629262	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv527672	chr4:54626228-54637201	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54626000-54629400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:54627200-54629400	Weak transcription	NHLF	lung
3	chr4:54629000-54630400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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