Variant report

Variant	rs11158760
Chromosome Location	chr14:69175149-69175150
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69171674..69175443-chr14:69177716..69181490,3	K562	blood:
2	chr14:69172247..69173998-chr14:69174200..69176922,2	MCF-7	breast:
3	chr14:69174675..69177475-chr14:69262277..69265148,2	K562	blood:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1034485	1.00[CEU][hapmap];0.83[AFR][1000 genomes]
rs168964	0.94[CEU][hapmap]
rs168965	0.83[AFR][1000 genomes]
rs194773	0.94[CEU][hapmap];0.83[AFR][1000 genomes]
rs194776	0.83[AFR][1000 genomes]
rs194781	0.94[CEU][hapmap]
rs194782	0.94[CEU][hapmap];0.83[AFR][1000 genomes]
rs381336	0.94[CEU][hapmap];0.83[AFR][1000 genomes]
rs383721	0.94[CEU][hapmap]
rs387618	0.83[AFR][1000 genomes]
rs404539	0.88[CEU][hapmap]
rs405329	1.00[CEU][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs407929	0.83[AFR][1000 genomes]
rs408608	0.83[AFR][1000 genomes]
rs409633	0.94[CEU][hapmap];0.83[AFR][1000 genomes]
rs412016	1.00[CEU][hapmap];0.83[AFR][1000 genomes]
rs440489	1.00[CEU][hapmap];0.83[AFR][1000 genomes]
rs444883	1.00[CEU][hapmap];0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1329	chr14:69142476-69176987	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69168800-69176000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr14:69169200-69175200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr14:69170200-69175400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr14:69170800-69177200	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr14:69171400-69175400	Enhancers	Stomach Smooth Muscle	stomach
6	chr14:69171800-69179800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr14:69173200-69178400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr14:69173400-69176000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr14:69173400-69179800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr14:69173600-69176200	Weak transcription	Gastric	stomach
11	chr14:69173600-69177600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:69173600-69178000	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr14:69173600-69178400	Weak transcription	Fetal Intestine Large	intestine
14	chr14:69173600-69178800	Weak transcription	Fetal Lung	lung
15	chr14:69173600-69179800	Weak transcription	Right Atrium	heart
16	chr14:69173600-69194200	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
18	chr14:69173800-69175800	Weak transcription	Stomach Mucosa	stomach
19	chr14:69173800-69178000	Weak transcription	Left Ventricle	heart
20	chr14:69173800-69178000	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr14:69173800-69178200	Weak transcription	Spleen	Spleen
22	chr14:69173800-69179000	Weak transcription	Colon Smooth Muscle	Colon
23	chr14:69173800-69180600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr14:69173800-69180600	Weak transcription	NHEK	skin
25	chr14:69173800-69184200	Weak transcription	Ovary	ovary
26	chr14:69174000-69176200	Weak transcription	Pancreas	Pancrea
27	chr14:69174000-69177200	Weak transcription	Esophagus	oesophagus
28	chr14:69174000-69177400	Weak transcription	Placenta	Placenta
29	chr14:69174000-69177600	Weak transcription	Lung	lung
30	chr14:69174000-69178000	Weak transcription	Fetal Thymus	thymus
31	chr14:69174000-69181600	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr14:69174000-69181800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr14:69174800-69177200	Enhancers	Liver	Liver
34	chr14:69175000-69181600	Weak transcription	Adipose Nuclei	Adipose

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