Variant report

Variant	rs194776
Chromosome Location	chr14:69195403-69195404
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69193054..69195600-chr14:69237307..69239865,2	K562	blood:
2	chr14:69195069..69196789-chr14:69199130..69200741,2	MCF-7	breast:
3	chr14:69193445..69195647-chr14:69250713..69253431,2	MCF-7	breast:
4	chr14:69186666..69188197-chr14:69195401..69198346,2	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1034485	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11158760	0.83[AFR][1000 genomes]
rs168964	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs168965	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs194773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs194781	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs194782	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs381336	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs383721	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs387618	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs404539	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs405329	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs407929	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs408608	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs409633	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs412016	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs440489	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs444883	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9323519	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
2	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr14:69187400-69200000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr14:69187800-69199400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr14:69189800-69196200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr14:69193000-69200800	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr14:69193800-69197400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr14:69194000-69195800	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr14:69194200-69195600	Enhancers	Sigmoid Colon	Sigmoid Colon
10	chr14:69194200-69195800	Enhancers	Liver	Liver
11	chr14:69194200-69196000	Enhancers	Fetal Intestine Large	intestine
12	chr14:69194200-69196600	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr14:69194200-69196800	Enhancers	HUVEC	blood vessel
14	chr14:69194200-69199200	Enhancers	Fetal Muscle Leg	muscle
15	chr14:69194400-69195600	Enhancers	Fetal Kidney	kidney
16	chr14:69194400-69195600	Enhancers	Fetal Lung	lung
17	chr14:69194400-69196600	Enhancers	Fetal Intestine Small	intestine
18	chr14:69194400-69196600	Enhancers	Stomach Mucosa	stomach
19	chr14:69194400-69198000	Enhancers	Primary B cells from peripheral blood	blood
20	chr14:69194600-69195600	Enhancers	Fetal Muscle Trunk	muscle
21	chr14:69194600-69195600	Flanking Active TSS	HepG2	liver
22	chr14:69194600-69195800	Enhancers	Right Atrium	heart
23	chr14:69194600-69197000	Enhancers	Lung	lung
24	chr14:69194600-69198400	Enhancers	Placenta	Placenta
25	chr14:69194600-69198400	Enhancers	Left Ventricle	heart
26	chr14:69194800-69196000	Enhancers	Duodenum Mucosa	Duodenum
27	chr14:69194800-69196400	Enhancers	Small Intestine	intestine
28	chr14:69194800-69199400	Enhancers	Fetal Heart	heart
29	chr14:69195000-69195600	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr14:69195000-69196400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr14:69195000-69196800	Enhancers	K562	blood
32	chr14:69195000-69197000	Weak transcription	Fetal Stomach	stomach
33	chr14:69195000-69197400	Weak transcription	Brain Anterior Caudate	brain
34	chr14:69195200-69195600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
35	chr14:69195200-69196000	Enhancers	Gastric	stomach
36	chr14:69195200-69197000	Enhancers	Spleen	Spleen
37	chr14:69195200-69198400	Enhancers	Primary B cells from cord blood	blood
38	chr14:69195200-69201600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr14:69195400-69195600	Enhancers	Brain Substantia Nigra	brain
40	chr14:69195400-69196600	Weak transcription	Fetal Thymus	thymus
41	chr14:69195400-69197400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr14:69195400-69197400	Weak transcription	Adipose Nuclei	Adipose
43	chr14:69195400-69197600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
44	chr14:69195400-69199800	Weak transcription	Primary T helper cells fromperipheralblood	blood

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